General information
PDB ID 3QFQ
Title ASYMMETRIC ASSEMBLY OF MERKEL CELL POLYOMAVIRUS LARGE T-ANTIGEN ORIGIN BINDING DOMAINS AT THE VIRAL ORIGIN
PDB header DNA BINDING PROTEIN/DNA
Date 2011-01-22
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.9
Kind dna
Organism MERKEL CELL POLYOMAVIRUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3qfq.pdb ABE WC 0
Biounits:
3qfq.pdb1.pdb ABE WC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
T_Ag_DNA_bind Domain E2IPT4_235-327 2.4e-35 1 CL0169 A 313 405 CW  H-Bb S-Bb L-Bb L-Mj 
T_Ag_DNA_bind Domain E2IPT4_235-327 2.5e-35 1 CL0169 B 313 405 CW  H-Bb L-Bb L-Mj 
T_Ag_DNA_bind Domain E2IPT4_235-327 2.3e-35 1 CL0169 E 313 405 CW  H-Bb S-Bb S-Mj L-Bb L-Mj 
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
3qfq.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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W (dna): 
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A (protein): 
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B (protein): 
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E (protein): 
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