General information
PDB ID 3QMB
Title STRUCTURAL BASIS OF SELECTIVE BINDING OF NONMETHYLATED CPG ISLANDS BY THE CXXC DOMAIN OF CFP1
PDB header DNA BINDING PROTEIN/DNA
Date 2011-02-04
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.06
Kind dna
Organism HOMO SAPIENS
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3qmb.pdb A BC 0
Biounits:
3qmb.pdb1.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-CXXC Domain Q9P0U4_164-208 4e-18 1 No_clan A 168 212 BC  H-Bb L-Bb L-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=161-222 C Set1C/COMPASS complex
A=161-222 C nuclear matrix
A=161-222 C nuclear speck
A=161-222 F unmethylated CpG binding
A=161-222 F zinc ion binding
A=161-222 P activation of signaling protein activity involved in unfolded protein response
A=161-222 P transcription, DNA-dependent
A=161-222 P positive regulation of transcription, DNA-dependent
A=161-222 P histone H3-K4 methylation
Sequences
Download file with secondary structure created by Stride  
3qmb.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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