General information
PDB ID 3QMD
Title STRUCTURAL BASIS OF SELECTIVE BINDING OF NONMETHYLATED CPG ISLANDS BY THE CXXC DOMAIN OF CFP1
PDB header DNA BINDING PROTEIN/DNA
Date 2011-02-04
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.9
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3qmd.pdb A BC 0
Biounits:
3qmd.pdb1.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-CXXC Domain Q9P0U4_164-208 4.3e-18 1 No_clan A 169 212 BC  L-Bb L-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=161-222 C cytosol
A=161-222 C histone methyltransferase complex
A=161-222 C nuclear matrix
A=161-222 C nuclear speck
A=161-222 C nucleoplasm
A=161-222 C nucleus
A=161-222 C Set1C/COMPASS complex
A=161-222 F cis-regulatory region sequence-specific DNA binding
A=161-222 F methylated histone binding
A=161-222 F unmethylated CpG binding
A=161-222 F zinc ion binding
A=161-222 P histone H3-K4 methylation
A=161-222 P IRE1-mediated unfolded protein response
A=161-222 P positive regulation of transcription, DNA-templated
A=161-222 P regulation of transcription, DNA-templated
Sequences
Download file with secondary structure created by Stride  
3qmd.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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