General information
PDB ID 3QOQ
Title CRYSTAL STRUCTURE OF THE TRANSCRIPTION FACTOR AMRZ IN COMPLEX WITH THE 18 BASE PAIR AMRZ1 BINDING SITE
PDB header TRANSCRIPTION/DNA
Date 2011-02-10
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.1
Kind dna
Organism PSEUDOMONAS AERUGINOSA
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3qoq.pdb ABCD EF 0
Biounits:
3qoq.pdb1.pdb ABCD EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Arc Domain G3XCY4_16-62 8.8e-21 1 CL0057 A 13 59 EF  H-Bb S-Bb S-Mj L-Bb 
Arc Domain G3XCY4_16-62 3e-19 1 CL0057 B 16 59 EF  H-Bb S-Bb S-Mj 
Arc Domain G3XCY4_16-62 2.6e-20 1 CL0057 C 13 58 EF  H-Bb S-Mj L-Bb L-Mj 
Arc Domain G3XCY4_16-62 8.4e-21 1 CL0057 D 16 62 FE  S-Bb S-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/C/D=1-66 C protein-DNA complex
A/B/C/D=1-66 F bacterial-type cis-regulatory region sequence-specific DNA binding
A/B/C/D=1-66 F DNA binding
A/B/C/D=1-66 F DNA-binding transcription repressor activity
A/B/C/D=1-66 F sequence-specific DNA binding
A/B/C/D=1-66 F transcription regulatory region sequence-specific DNA binding
A/B/C/D=1-66 P bacterial-type flagellum assembly
A/B/C/D=1-66 P negative regulation of bacterial-type flagellum-dependent cell motility
A/B/C/D=1-66 P negative regulation of single-species biofilm formation on inanimate substrate
A/B/C/D=1-66 P negative regulation of transcription, DNA-templated
A/B/C/D=1-66 P pathogenesis
A/B/C/D=1-66 P positive regulation of cell motility
A/B/C/D=1-66 P positive regulation of single-species biofilm formation on inanimate substrate
A/B/C/D=1-66 P regulation of polysaccharide biosynthetic process
A/B/C/D=1-66 P type IV pilus-dependent motility
Sequences
Download file with secondary structure created by Stride  
3qoq.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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