General information
PDB ID 3R8F
Title REPLICATION INITIATOR DNAA BOUND TO AMPPCP AND SINGLE-STRANDED DNA
PDB header REPLICATION ACTIVATOR/DNA
Date 2011-03-23
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.37
Kind dna
Organism AQUIFEX AEOLICUS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA WebPDA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3r8f.pdb ABCD E 0
Biounits:
3r8f.pdb1.pdb ABCD E 1
Pfam domains
Name: Type: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Action:
Bac_DnaA Domain 1.4e-69 1 CL0023 A 79 295 E
Bac_DnaA_C Domain 2.5e-22 1 CL0123 A 305 373
Bac_DnaA Domain 1.4e-69 1 CL0023 B 79 295 E
Bac_DnaA_C Domain 2.5e-22 1 CL0123 B 305 373
Bac_DnaA Domain 1.4e-69 1 CL0023 C 79 295 E
Bac_DnaA_C Domain 2.5e-22 1 CL0123 C 305 373
Bac_DnaA Domain 1.4e-69 1 CL0023 D 79 295 E
Bac_DnaA_C Domain 2.5e-22 1 CL0123 D 305 373
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/C/D=76-399 C cytoplasm
A/B/C/D=76-399 F nucleoside-triphosphatase activity
A/B/C/D=76-399 F DNA replication origin binding
A/B/C/D=76-399 F ATP binding
A/B/C/D=76-399 P regulation of DNA replication
A/B/C/D=76-399 P DNA-dependent DNA replication initiation
Sequences
Download file with secondary structure created by Stride  
3r8f.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2017

text