General information
PDB ID 3R9W
Title CRYSTAL STRUCTURE OF ERA IN COMPLEX WITH MGGDPNP AND NUCLEOTIDES 1506- 1542 OF 16S RIBOSOMAL RNA
PDB header HYDROLASE/RNA
Date 2011-03-26
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.05
Kind rna
Organism AQUIFEX AEOLICUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3r9w.pdb A B 0
Biounits:
3r9w.pdb1.pdb A B 1
3r9w.pdb2.pdb AC BD 0
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
KH_2 Domain O67800_209-288 1.1e-17 1 CL0007 A 209 288 B   
KH_2 Domain O67800_209-288 1.1e-17 1 CL0007 A 209 288 B   
KH_2 Domain O67800_209-288 1.1e-17 1 CL0007 A 209 288 BD   
KH_2 Domain O67800_209-288 1.1e-17 1 CL0007 A 209 288 BD   
KH_2 Domain 1.1e-17 1 CL0007 C 209 288 BD
MMR_HSR1 Family O67800_5-124 1.2e-26 1 CL0023 A 5 124 B   
MMR_HSR1 Family O67800_5-124 1.2e-26 1 CL0023 A 5 124 B   
MMR_HSR1 Family O67800_5-124 1.2e-26 1 CL0023 A 5 124 B   
MMR_HSR1 Family O67800_5-124 1.2e-26 1 CL0023 A 5 124 B   
MMR_HSR1_Xtn Family 0.00009 0 No_clan A 106 174
MMR_HSR1_Xtn Family 0.00009 0 No_clan A 106 174
MMR_HSR1 Family 1.2e-26 1 CL0023 C 5 124 D
MMR_HSR1_Xtn Family 0.00009 0 No_clan C 106 174
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=1-301 C cytoplasm
A=1-301 C plasma membrane
A=1-301 F GTP binding
A=1-301 F rRNA binding
A=1-301 P ribosome biogenesis
Sequences
Download file with secondary structure created by Stride  
3r9w.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (rna): 
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3r9w.pdb2.pdb:   [ download sequences in FASTA format ]
A (protein): 
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C (protein): 
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B (rna): 
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D (rna): 
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