General information
PDB ID 3TAB
Title 5-HYDROXYCYTOSINE PAIRED WITH DGMP IN RB69 GP43
PDB header TRANSFERASE/DNA
Date 2011-08-03
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.8
Kind dna
Organism ENTEROBACTERIA PHAGE RB69
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3tab.pdb ABCD EFGHIJKL 0
Biounits:
3tab.pdb1.pdb A EF 1
3tab.pdb2.pdb B GH 1
3tab.pdb3.pdb C IJ 1
3tab.pdb4.pdb D KL 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_pol_B Family Q38087_363-784 2.4e-29 1 CL0194 A 363 784 EF  H-Bb S-Bb L-Bb L-Mn 
DNA_pol_B_exo1 Family Q38087_19-293 2.4e-26 1 CL0219 A 19 293 F  L-Bb 
DNA_pol_B Family Q38087_363-784 2.4e-29 1 CL0194 B 363 784 GH  H-Bb S-Bb L-Bb L-Mn 
DNA_pol_B_exo1 Family Q38087_19-293 2.4e-26 1 CL0219 B 19 293 H  L-Bb 
DNA_pol_B Family Q38087_363-784 2.4e-29 1 CL0194 C 363 784 IJ  S-Bb L-Bb L-Mn 
DNA_pol_B_exo1 Family Q38087_19-293 2.4e-26 1 CL0219 C 19 293 J  L-Bb 
DNA_pol_B Family Q38087_363-784 2.4e-29 1 CL0194 D 363 784 KL  S-Bb L-Bb L-Mn 
DNA_pol_B_exo1 Family Q38087_19-293 2.4e-26 1 CL0219 D 19 293 L  L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/C/D=1-903 F 3'-5' exonuclease activity
A/B/C/D=1-903 F DNA binding
A/B/C/D=1-903 F DNA-directed DNA polymerase activity
A/B/C/D=1-903 F metal ion binding
A/B/C/D=1-903 F nucleotide binding
A/B/C/D=1-903 P bidirectional double-stranded viral DNA replication
A/B/C/D=1-903 P DNA replication
Sequences
Download file with secondary structure created by Stride  
3tab.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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A (protein): 
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3tab.pdb2.pdb:   [ download sequences in FASTA format ]
G (dna): 
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H (dna): 
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B (protein): 
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3tab.pdb3.pdb:   [ download sequences in FASTA format ]
I (dna): 
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J (dna): 
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C (protein): 
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3tab.pdb4.pdb:   [ download sequences in FASTA format ]
K (dna): 
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L (dna): 
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D (protein): 
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