General information
PDB ID 3V7K
Title CO-CRYSTAL STRUCTURE OF K72E VARIANT OF RAT POLYMERASE BETA: ENZYME- DNA BINARY COMPLEX
PDB header TRANSFERASE/DNA
Date 2011-12-21
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.27
Kind dna
Organism RATTUS NORVEGICUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3v7k.pdb A PT 0
Biounits:
3v7k.pdb1.pdb A PT 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_pol_B_palm Domain P06766_149-262 8.5e-40 1 CL0260 A 149 262 PT  S-Bb L-Bb 
DNA_pol_lambd_f Domain P06766_98-147 1e-19 1 CL0198 A 98 147 PT  H-Bb L-Bb 
HHH_8 Domain P06766_12-78 1.4e-17 1 CL0198 A 12 78 T   
DNA_pol_B_thumb Family P06766_268-334 4.5e-17 1 No_clan A 268 334 T   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=4-335 C cytoplasm
A=4-335 C microtubule
A=4-335 C nucleus
A=4-335 C protein-containing complex
A=4-335 C spindle microtubule
A=4-335 F damaged DNA binding
A=4-335 F DNA binding
A=4-335 F DNA-directed DNA polymerase activity
A=4-335 F enzyme binding
A=4-335 F lyase activity
A=4-335 F metal ion binding
A=4-335 F microtubule binding
A=4-335 P aging
A=4-335 P apoptotic process
A=4-335 P base-excision repair
A=4-335 P base-excision repair, gap-filling
A=4-335 P cellular response to DNA damage stimulus
A=4-335 P DNA replication
A=4-335 P double-strand break repair via nonhomologous end joining
A=4-335 P homeostasis of number of cells
A=4-335 P immunoglobulin heavy chain V-D-J recombination
A=4-335 P in utero embryonic development
A=4-335 P inflammatory response
A=4-335 P intrinsic apoptotic signaling pathway in response to DNA damage
A=4-335 P lymph node development
A=4-335 P neuron apoptotic process
A=4-335 P pyrimidine dimer repair
A=4-335 P response to ethanol
A=4-335 P response to gamma radiation
A=4-335 P response to hyperoxia
A=4-335 P salivary gland morphogenesis
A=4-335 P somatic diversification of immunoglobulins
A=4-335 P somatic hypermutation of immunoglobulin genes
A=4-335 P spleen development
Sequences
Download file with secondary structure created by Stride  
3v7k.pdb1.pdb:   [ download sequences in FASTA format ]
P (dna): 
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T (dna): 
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A (protein): 
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