General information
PDB ID 3X1U
Title CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE IN THE PRESENCE OF HISTONE VARIANTS INVOLVED IN REPROGRAMMING
PDB header STRUCTURAL PROTEIN/DNA
Date 2014-11-28
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.25
Kind dna
Organism SYNTHETIC, HOMO SAPIENS, MUS MUSCULUS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3x1u.pdb ABCDEFGH IJ 0
Biounits:
3x1u.pdb1.pdb ABCDEFGH IJ 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Histone Domain P68431_39-132 9.5e-47 1 CL0012 A 38 131 IJ  H-Bb H-Mj L-Bb 
CENP-T_C Domain P62805_19-99 0.0000000095 1 CL0012 B 24 98 IJ  S-Bb L-Bb 
Histone Domain Q8CGP4_15-91 1.1e-17 1 CL0012 C 14 90 IJ  H-Bb S-Bb L-Bb 
Histone Domain P33778_34-102 8.5e-22 1 CL0012 D 32 101 IJ  H-Bb H-Mj S-Bb L-Bb 
Histone Domain P68431_39-132 4.3e-47 1 CL0012 E 37 131 IJ  H-Bb H-Mj S-Bb L-Bb 
CENP-T_C Domain P62805_19-99 0.00000001 1 CL0012 F 20 98 IJ  H-Bb S-Bb L-Bb 
Histone Domain Q8CGP4_15-91 6e-18 1 CL0012 G 11 90 IJ  H-Bb S-Bb L-Bb 
Histone Domain P33778_34-102 8.5e-22 1 CL0012 H 32 101 IJ  H-Bb H-Mj S-Bb L-Bb 
Histone_H2A_C Family Q8CGP4_92-120 1.5e-17 1 No_clan C 91 118   
Histone_H2A_C Family Q8CGP4_92-120 1.9e-18 1 No_clan G 91 119   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
3x1u.pdb1.pdb:   [ download sequences in FASTA format ]
I (dna): 
Click "SHOW" for view sequence
J (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
E (protein): 
Click "SHOW" for view sequence
F (protein): 
Click "SHOW" for view sequence
G (protein): 
Click "SHOW" for view sequence
H (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text