General information
PDB ID 4D6N
Title THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 10 DAYS INCUBATION IN 5MM MG (STATE 7)
PDB header HYDROLASE/DNA
Date 2014-11-13
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.35
Kind dna
Organism DESULFUROCOCCUS MOBILIS, SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4d6n.pdb AFK BCDEGHIJLMNO 0
Biounits:
4d6n.pdb1.pdb K LMNO 1
4d6n.pdb2.pdb F GHIJ 1
4d6n.pdb3.pdb A BCDE 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
LAGLIDADG_3 Domain P21505_104-178 0.0000000002 1 CL0324 A 107 178 BDE  H-Bb H-Mj S-Bb S-Mj L-Bb L-Mj 
LAGLIDADG_3 Domain P21505_8-96 0.00000065 1 CL0324 A 11 95 BCD  H-Bb S-Bb S-Mj L-Bb L-Mj 
LAGLIDADG_3 Domain P21505_104-178 0.00000000022 1 CL0324 F 107 178 GIJ  H-Bb H-Mj S-Bb S-Mj L-Bb L-Mj 
LAGLIDADG_3 Domain P21505_8-96 0.00000072 1 CL0324 F 11 95 GHI  H-Bb S-Bb S-Mj L-Bb L-Mj 
LAGLIDADG_3 Domain P21505_104-178 0.00000000019 1 CL0324 K 107 178 LNO  H-Bb H-Mj S-Bb S-Mj L-Bb L-Mj 
LAGLIDADG_3 Domain P21505_8-96 0.0000006 1 CL0324 K 11 95 LMN  H-Bb S-Bb S-Mj L-Bb 
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
4d6n.pdb1.pdb:   [ download sequences in FASTA format ]
L (dna): 
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M (dna): 
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N (dna): 
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O (dna): 
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K (protein): 
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4d6n.pdb2.pdb:   [ download sequences in FASTA format ]
G (dna): 
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H (dna): 
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I (dna): 
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J (dna): 
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F (protein): 
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4d6n.pdb3.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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D (dna): 
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E (dna): 
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A (protein): 
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