General information
PDB ID 4D6O
Title THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 1H INCUBATION IN 5MM MG (STATE 2)
PDB header HYDROLASE/DNA
Date 2014-11-13
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.2
Kind dna
Organism DESULFUROCOCCUS MOBILIS, SYNTHETIC CONSTRUCT
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4d6o.pdb ADG BCEFHI 0
Biounits:
4d6o.pdb1.pdb D EF 1
4d6o.pdb2.pdb G HI 1
4d6o.pdb3.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
LAGLIDADG_3 Domain P21505_104-178 0.0000000002 1 CL0324 A 107 178 BC  H-Bb H-Mj S-Bb S-Mj L-Bb L-Mj 
LAGLIDADG_3 Domain P21505_8-96 0.00000064 1 CL0324 A 11 95 BC  H-Bb S-Bb S-Mj L-Bb L-Mj 
LAGLIDADG_3 Domain P21505_104-178 0.00000000022 1 CL0324 D 107 178 EF  H-Bb H-Mj S-Bb S-Mj L-Bb L-Mj 
LAGLIDADG_3 Domain P21505_8-96 0.00000072 1 CL0324 D 11 95 EF  H-Bb S-Bb S-Mj L-Bb L-Mj 
LAGLIDADG_3 Domain P21505_104-178 0.00000000018 1 CL0324 G 107 178 HI  H-Bb H-Mj S-Bb S-Mj L-Bb L-Mj 
LAGLIDADG_3 Domain P21505_8-96 0.00000059 1 CL0324 G 11 95 HI  H-Bb S-Bb S-Mj L-Bb L-Mj 
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
4d6o.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
Click "SHOW" for view sequence
F (dna): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
4d6o.pdb2.pdb:   [ download sequences in FASTA format ]
H (dna): 
Click "SHOW" for view sequence
I (dna): 
Click "SHOW" for view sequence
G (protein): 
Click "SHOW" for view sequence
4d6o.pdb3.pdb:   [ download sequences in FASTA format ]
B (dna): 
Click "SHOW" for view sequence
C (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text