General information
PDB ID 4D8J
Title STRUCTURE OF E. COLI MATP-MATS COMPLEX
PDB header DNA BINDING PROTEIN
Date 2012-01-10
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.55
Kind dna
Organism ESCHERICHIA COLI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4d8j.pdb BADCHGLK NMFEJIPO 0
Biounits:
4d8j.pdb1.pdb BALKCF NMPODE 0
4d8j.pdb2.pdb DCHGA FEJIBG 0
4d8j.pdb3.pdb HGDCA JIFEBC 0
4d8j.pdb4.pdb LKBAD PONMBC 0
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan A 2 85 BC   
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan A 2 85 BC   
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan A 2 85 BC   
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan A 2 85 BC   
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan A 2 85 BG   
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan A 2 85 BG   
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan A 2 85 BG   
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan A 2 85 BG   
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan A 2 85 MN   
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan A 2 85 MN   
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan A 2 85 MN   
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan A 2 85 MN   
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan A 2 85 BC   
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan A 2 85 BC   
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan A 2 85 BC   
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan A 2 85 BC   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 N  S-Bb S-Mj 
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 N   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 N   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 N   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 BC  S-Bb S-Mj 
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 BC   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 BC   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 BC   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 BC  S-Bb S-Mj 
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 BC   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 BC   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 BC   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 BG  S-Bb S-Mj 
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 BG   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 BG   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 A 88 147 BG   
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan B 2 85 MN  H-Bb H-Mj 
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 B 88 147 M   
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan C 2 85 EF   
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan C 2 85 EF  H-Bb H-Mj L-Bb 
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan C 2 85 DE   
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan C 2 85 DE  H-Bb H-Mj L-Bb 
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 C 88 147 DE   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 C 88 147 DE  H-Bb S-Bb S-Mj 
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 C 88 147 EF   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 C 88 147 EF  H-Bb S-Bb S-Mj 
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan D 2 85 BC  H-Bb H-Mj 
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan D 2 85 BC   
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan D 2 85 BC   
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan D 2 85 BC  H-Bb H-Mj 
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan D 2 85 BC   
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan D 2 85 BC   
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan D 2 85 EF  H-Bb H-Mj 
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan D 2 85 EF   
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan D 2 85 EF   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 D 88 147 BC  H-Bb S-Bb S-Mj L-Bb 
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 D 88 147 BC   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 D 88 147 BC   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 D 88 147 BC  H-Bb S-Bb S-Mj L-Bb 
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 D 88 147 BC   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 D 88 147 BC   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 D 88 147 EF  H-Bb S-Bb S-Mj L-Bb 
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 D 88 147 EF   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 D 88 147 EF   
MatP Domain 7.2e-44 1 No_clan F 2 85 DE
MatP_C Domain 3.6e-31 1 CL0057 F 88 147 DE
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan G 2 85 IJ  H-Bb H-Mj L-Bb 
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 G 88 147 IJ  H-Bb S-Bb S-Mj 
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan H 2 85 BG   
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan H 2 85 IJ  H-Bb H-Mj 
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 H 88 147 IJ  H-Bb S-Bb S-Mj L-Bb 
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 H 88 147 BG   
MatP Domain P0A8N0_2-85 7.2e-44 1 No_clan K 2 85 OP   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 K 88 147 OP   
MatP Domain P0A8N0_2-85 7.3e-44 1 No_clan L 2 85 OP   
MatP_C Domain P0A8N0_88-147 3.6e-31 1 CL0057 L 88 147 OP   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
4d8j.pdb1.pdb:   [ download sequences in FASTA format ]
D (dna): 
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E (dna): 
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M (dna): 
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N (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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F (protein): 
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4d8j.pdb2.pdb:   [ download sequences in FASTA format ]
B (dna): 
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E (dna): 
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F (dna): 
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G (dna): 
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A (protein): 
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C (protein): 
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D (protein): 
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H (protein): 
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4d8j.pdb3.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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I (dna): 
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J (dna): 
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A (protein): 
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D (protein): 
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G (protein): 
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H (protein): 
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4d8j.pdb4.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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O (dna): 
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P (dna): 
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A (protein): 
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D (protein): 
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K (protein): 
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L (protein): 
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