General information
PDB ID 4E9H
Title STRUCTURE OF GLYCOSYLASE DOMAIN OF MBD4 BOUND TO 5HMU CONTAINING DNA
PDB header HYDROLASE/DNA
Date 2012-03-21
Experimental method X-RAY DIFFRACTION
Resolution (A) 3
Kind dna
Organism HOMO SAPIENS, SYNTHETIC
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4e9h.pdb A CD 0
Biounits:
4e9h.pdb1.pdb A CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
HhH-GPD Domain O95243_450-560 3.7e-05 0 CL0198 A 461 567 CD  H-Bb L-Bb L-Mj L-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=427-580 C host cell nucleus
A=427-580 C nuclear speck
A=427-580 C nucleoplasm
A=427-580 C nucleus
A=427-580 F DNA binding
A=427-580 F DNA N-glycosylase activity
A=427-580 F endodeoxyribonuclease activity
A=427-580 F pyrimidine-specific mismatch base pair DNA N-glycosylase activity
A=427-580 F satellite DNA binding
A=427-580 P depyrimidination
A=427-580 P DNA repair
A=427-580 P response to estradiol
Sequences
Download file with secondary structure created by Stride  
4e9h.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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