General information
PDB ID 4FCY
Title CRYSTAL STRUCTURE OF THE BACTERIOPHAGE MU TRANSPOSOSOME
PDB header DNA BINDING PROTEIN/DNA
Date 2012-05-25
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.71
Kind dna
Organism ENTEROBACTERIA PHAGE MU
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4fcy.pdb AB CED 0
Biounits:
4fcy.pdb1.pdb AB CED 2
4fcy.pdb2.pdb AB CED 4
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DDE_2 Domain P07636_225-337 1.9e-63 1 CL0219 A 247 400 C  L-Bb 
DDE_2 Domain P07636_225-337 1.9e-63 1 CL0219 A 247 400 C  L-Bb 
DDE_2 Domain P07636_225-337 1.9e-63 1 CL0219 A 247 400 C  L-Bb 
DDE_2 Domain P07636_225-337 1.9e-63 1 CL0219 A 247 400 C  L-Bb 
HTH_Tnp_Mu_2 Domain P07636_149-247 5e-35 1 CL0123 A 149 265 CD  H-Bb H-Mj L-Bb 
HTH_Tnp_Mu_2 Domain P07636_149-247 5e-35 1 CL0123 A 149 265 CD  H-Bb H-Mj L-Bb 
HTH_Tnp_Mu_2 Domain P07636_149-247 5e-35 1 CL0123 A 149 265 CD  H-Bb H-Mj L-Bb 
HTH_Tnp_Mu_2 Domain P07636_149-247 5e-35 1 CL0123 A 149 265 CD  H-Bb H-Mj L-Bb 
DDE_2 Domain P07636_337-410 2.2e-34 1 CL0219 A 400 473 DC  L-Bb 
DDE_2 Domain P07636_337-410 2.2e-34 1 CL0219 A 400 473 DC  L-Bb 
DDE_2 Domain P07636_337-410 2.2e-34 1 CL0219 A 400 473 DC  L-Bb 
DDE_2 Domain P07636_337-410 2.2e-34 1 CL0219 A 400 473 DC  L-Bb 
Mu-transpos_C Domain P07636_486-556 7.4e-18 1 No_clan A 486 556   
Mu-transpos_C Domain P07636_486-556 7.4e-18 1 No_clan A 486 556   
Mu-transpos_C Domain P07636_486-556 7.4e-18 1 No_clan A 486 556   
Mu-transpos_C Domain P07636_486-556 7.4e-18 1 No_clan A 486 556   
DDE_2 Domain P07636_258-473 3.3e-123 1 CL0219 B 242 473   
DDE_2 Domain P07636_258-473 3.3e-123 1 CL0219 B 242 473   
DDE_2 Domain P07636_258-473 3.3e-123 1 CL0219 B 242 473   
DDE_2 Domain P07636_258-473 3.3e-123 1 CL0219 B 242 473   
HTH_Tnp_Mu_2 Domain P07636_149-242 1.4e-32 1 CL0123 B 149 267 CD  H-Bb H-Mj L-Bb L-Mj 
HTH_Tnp_Mu_2 Domain P07636_149-242 1.4e-32 1 CL0123 B 149 267 CD  H-Bb H-Mj L-Bb L-Mj 
HTH_Tnp_Mu_2 Domain P07636_149-242 1.4e-32 1 CL0123 B 149 267 CD  H-Bb H-Mj L-Bb L-Mj 
HTH_Tnp_Mu_2 Domain P07636_149-242 1.4e-32 1 CL0123 B 149 267 CD  H-Bb H-Mj L-Bb L-Mj 
Mu-transpos_C Domain P07636_486-556 8.3e-18 1 No_clan B 486 556 CD  S-Bb L-Bb 
Mu-transpos_C Domain P07636_486-556 8.3e-18 1 No_clan B 486 556 CD  S-Bb L-Bb 
Mu-transpos_C Domain P07636_486-556 8.3e-18 1 No_clan B 486 556 CD  S-Bb L-Bb 
Mu-transpos_C Domain P07636_486-556 8.3e-18 1 No_clan B 486 556 CD  S-Bb L-Bb 
HTH_Tnp_Mu_1 Family P07636_88-143 9.9e-11 1 CL0123 A 88 143 CD  H-Bb H-Mj 
HTH_Tnp_Mu_1 Family P07636_88-143 9.9e-11 1 CL0123 A 88 143 CD  H-Bb H-Mj 
HTH_Tnp_Mu_1 Family P07636_88-143 9.9e-11 1 CL0123 A 88 143 CD  H-Bb H-Mj 
HTH_Tnp_Mu_1 Family P07636_88-143 9.9e-11 1 CL0123 A 88 143 CD  H-Bb H-Mj 
HTH_Tnp_Mu_1 Family P07636_88-143 1.1e-10 1 CL0123 B 88 143 D  H-Bb H-Mj L-Bb 
HTH_Tnp_Mu_1 Family P07636_88-143 1.1e-10 1 CL0123 B 88 143 D  H-Bb H-Mj L-Bb 
HTH_Tnp_Mu_1 Family P07636_88-143 1.1e-10 1 CL0123 B 88 143 D  H-Bb H-Mj L-Bb 
HTH_Tnp_Mu_1 Family P07636_88-143 1.1e-10 1 CL0123 B 88 143 D  H-Bb H-Mj L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=77-605 C host cell cytoplasm
A/B=77-605 F DNA binding
A/B=77-605 F double-stranded DNA endodeoxyribonuclease activity
A/B=77-605 F ligase activity
A/B=77-605 F metal ion binding
A/B=77-605 F transposase activity
A/B=77-605 P DNA integration
A/B=77-605 P DNA repair
A/B=77-605 P DNA replication
A/B=77-605 P latency-replication decision
A/B=77-605 P transposition, DNA-mediated
A/B=77-605 P viral DNA genome replication
Sequences
Download file with secondary structure created by Stride  
4fcy.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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E (dna): 
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A (protein): 
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B (protein): 
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4fcy.pdb2.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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E (dna): 
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A (protein): 
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B (protein): 
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