General information
PDB ID 4FCY
Title CRYSTAL STRUCTURE OF THE BACTERIOPHAGE MU TRANSPOSOSOME
PDB header DNA BINDING PROTEIN/DNA
Date 2012-05-25
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.71
Kind dna
Organism ENTEROBACTERIA PHAGE MU
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4fcy.pdb AB CED 0
Biounits:
4fcy.pdb1.pdb ABFG CEDHIJ 0
4fcy.pdb2.pdb ABFGKLPQ CEDHIJMNORST 0
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DDE_2 Domain 1.7e-63 1 CL0219 A 247 400 CM
DDE_2 Domain 1.7e-63 1 CL0219 A 247 400 CH
HTH_Tnp_Mu_2 Domain P07636_149-247 4.4e-35 1 CL0123 A 149 265 CD  H-Bb H-Mj L-Bb 
HTH_Tnp_Mu_2 Domain P07636_149-247 4.4e-35 1 CL0123 A 149 265 CD  H-Bb H-Mj L-Bb 
HTH_Tnp_Mu_2 Domain P07636_149-247 4.4e-35 1 CL0123 A 149 265 CD  H-Bb H-Mj L-Bb 
HTH_Tnp_Mu_2 Domain P07636_149-247 4.4e-35 1 CL0123 A 149 265 CD  H-Bb H-Mj L-Bb 
DDE_2 Domain 1.9e-34 1 CL0219 A 400 473 OM
DDE_2 Domain 1.9e-34 1 CL0219 A 400 473 JH
Mu-transpos_C Domain P07636_486-556 1.8e-17 1 No_clan A 486 556   
Mu-transpos_C Domain P07636_486-556 1.8e-17 1 No_clan A 486 556   
Mu-transpos_C Domain P07636_486-556 1.8e-17 1 No_clan A 486 556   
Mu-transpos_C Domain P07636_486-556 1.8e-17 1 No_clan A 486 556   
DDE_2 Domain P07636_258-473 2.8e-123 1 CL0219 B 242 473   
DDE_2 Domain P07636_258-473 2.8e-123 1 CL0219 B 242 473   
DDE_2 Domain P07636_258-473 2.8e-123 1 CL0219 B 242 473   
DDE_2 Domain P07636_258-473 2.8e-123 1 CL0219 B 242 473   
HTH_Tnp_Mu_2 Domain P07636_149-242 1.3e-32 1 CL0123 B 149 267 CD  H-Bb H-Mj L-Bb L-Mj 
HTH_Tnp_Mu_2 Domain P07636_149-242 1.3e-32 1 CL0123 B 149 267 CD  H-Bb H-Mj L-Bb L-Mj 
HTH_Tnp_Mu_2 Domain P07636_149-242 1.3e-32 1 CL0123 B 149 267 CD  H-Bb H-Mj L-Bb L-Mj 
HTH_Tnp_Mu_2 Domain P07636_149-242 1.3e-32 1 CL0123 B 149 267 CD  H-Bb H-Mj L-Bb L-Mj 
Mu-transpos_C Domain P07636_486-556 2e-17 1 No_clan B 486 556 DM  S-Bb L-Bb 
Mu-transpos_C Domain P07636_486-556 2e-17 1 No_clan B 486 556 DM  L-Bb 
Mu-transpos_C Domain P07636_486-556 2e-17 1 No_clan B 486 556 DH  S-Bb L-Bb 
Mu-transpos_C Domain P07636_486-556 2e-17 1 No_clan B 486 556 DH  L-Bb 
DDE_2 Domain 1.7e-63 1 CL0219 F 247 400 CH
DDE_2 Domain 1.7e-63 1 CL0219 F 247 400 HR
HTH_Tnp_Mu_2 Domain 4.4e-35 1 CL0123 F 149 265 HJ
HTH_Tnp_Mu_2 Domain 4.4e-35 1 CL0123 F 149 265 HJ
DDE_2 Domain 1.9e-34 1 CL0219 F 400 473 DC
DDE_2 Domain 1.9e-34 1 CL0219 F 400 473 TR
Mu-transpos_C Domain 1.8e-17 1 No_clan F 486 556
Mu-transpos_C Domain 1.8e-17 1 No_clan F 486 556
DDE_2 Domain 2.8e-123 1 CL0219 G 242 473
DDE_2 Domain 2.8e-123 1 CL0219 G 242 473
HTH_Tnp_Mu_2 Domain 1.3e-32 1 CL0123 G 149 267 HJ
HTH_Tnp_Mu_2 Domain 1.3e-32 1 CL0123 G 149 267 HJ
Mu-transpos_C Domain 2e-17 1 No_clan G 486 556 CJ
Mu-transpos_C Domain 2e-17 1 No_clan G 486 556 JR
DDE_2 Domain 1.7e-63 1 CL0219 K 247 400 CM
HTH_Tnp_Mu_2 Domain 4.4e-35 1 CL0123 K 149 265 MO
DDE_2 Domain 1.9e-34 1 CL0219 K 400 473 DC
Mu-transpos_C Domain 1.8e-17 1 No_clan K 486 556
DDE_2 Domain 2.8e-123 1 CL0219 L 242 473
HTH_Tnp_Mu_2 Domain 1.3e-32 1 CL0123 L 149 267 MO
Mu-transpos_C Domain 2e-17 1 No_clan L 486 556 CO
DDE_2 Domain 1.7e-63 1 CL0219 P 247 400 HR
HTH_Tnp_Mu_2 Domain 4.4e-35 1 CL0123 P 149 265 RT
DDE_2 Domain 1.9e-34 1 CL0219 P 400 473 JH
Mu-transpos_C Domain 1.8e-17 1 No_clan P 486 556
DDE_2 Domain 2.8e-123 1 CL0219 Q 242 473
HTH_Tnp_Mu_2 Domain 1.3e-32 1 CL0123 Q 149 267 RT
Mu-transpos_C Domain 2e-17 1 No_clan Q 486 556 HT
HTH_Tnp_Mu_1 Family P07636_88-143 0.000000000087 1 CL0123 A 88 143 CD  H-Bb 
HTH_Tnp_Mu_1 Family P07636_88-143 0.000000000087 1 CL0123 A 88 143 CD  H-Bb 
HTH_Tnp_Mu_1 Family P07636_88-143 0.000000000087 1 CL0123 A 88 143 CD  H-Bb 
HTH_Tnp_Mu_1 Family P07636_88-143 0.000000000087 1 CL0123 A 88 143 CD  H-Bb 
HTH_Tnp_Mu_1 Family P07636_88-143 0.000000000096 1 CL0123 B 88 143 D  L-Bb 
HTH_Tnp_Mu_1 Family P07636_88-143 0.000000000096 1 CL0123 B 88 143 D  L-Bb 
HTH_Tnp_Mu_1 Family P07636_88-143 0.000000000096 1 CL0123 B 88 143 D  L-Bb 
HTH_Tnp_Mu_1 Family P07636_88-143 0.000000000096 1 CL0123 B 88 143 D  L-Bb 
HTH_Tnp_Mu_1 Family 0.000000000087 1 CL0123 F 88 143 HJ
HTH_Tnp_Mu_1 Family 0.000000000087 1 CL0123 F 88 143 HJ
HTH_Tnp_Mu_1 Family 0.000000000096 1 CL0123 G 88 143 J
HTH_Tnp_Mu_1 Family 0.000000000096 1 CL0123 G 88 143 J
HTH_Tnp_Mu_1 Family 0.000000000087 1 CL0123 K 88 143 MO
HTH_Tnp_Mu_1 Family 0.000000000096 1 CL0123 L 88 143 O
HTH_Tnp_Mu_1 Family 0.000000000087 1 CL0123 P 88 143 RT
HTH_Tnp_Mu_1 Family 0.000000000096 1 CL0123 Q 88 143 T
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
4fcy.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
Click "SHOW" for view sequence
D (dna): 
Click "SHOW" for view sequence
E (dna): 
Click "SHOW" for view sequence
H (dna): 
Click "SHOW" for view sequence
I (dna): 
Click "SHOW" for view sequence
J (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
F (protein): 
Click "SHOW" for view sequence
G (protein): 
Click "SHOW" for view sequence
4fcy.pdb2.pdb:   [ download sequences in FASTA format ]
C (dna): 
Click "SHOW" for view sequence
D (dna): 
Click "SHOW" for view sequence
E (dna): 
Click "SHOW" for view sequence
H (dna): 
Click "SHOW" for view sequence
I (dna): 
Click "SHOW" for view sequence
J (dna): 
Click "SHOW" for view sequence
M (dna): 
Click "SHOW" for view sequence
N (dna): 
Click "SHOW" for view sequence
O (dna): 
Click "SHOW" for view sequence
R (dna): 
Click "SHOW" for view sequence
S (dna): 
Click "SHOW" for view sequence
T (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
F (protein): 
Click "SHOW" for view sequence
G (protein): 
Click "SHOW" for view sequence
K (protein): 
Click "SHOW" for view sequence
L (protein): 
Click "SHOW" for view sequence
P (protein): 
Click "SHOW" for view sequence
Q (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text