General information
PDB ID 4FO6
Title CRYSTAL STRUCTURE OF THE PRE-CATALYTIC TERNARY COMPLEX OF POLYMERASE LAMBDA WITH A DATP ANALOG OPPOSITE A TEMPLATING T AND AN RCMP AT THE PRIMER TERMINUS.
PDB header TRANSFERASE, LYASE/DNA
Date 2012-06-20
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.01
Kind hybrid
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB  PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4fo6.pdb A TPDHI P 0
Biounits:
4fo6.pdb1.pdb A TPDHI P 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_pol_B_palm Domain Q9UGP5_386-496 2e-32 1 CL0260 A 386 496 IPTH   
DNA_pol_lambd_f Domain Q9UGP5_336-384 5.3e-21 1 CL0198 A 336 384 PT   
HHH_8 Domain Q9UGP5_253-318 2.4e-18 1 CL0198 A 253 318 DT   
DNA_pol_B_thumb Family Q9UGP5_502-574 1.6e-22 1 No_clan A 502 574 PTH   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=242-575 C nucleus
A=242-575 F lyase activity
A=242-575 F DNA binding
A=242-575 F metal ion binding
A=242-575 F DNA-directed DNA polymerase activity
A=242-575 P nucleotide-excision repair
A=242-575 P somatic hypermutation of immunoglobulin genes
A=242-575 P DNA replication
Sequences
Download file with secondary structure created by Stride  
4fo6.pdb1.pdb:   [ download sequences in FASTA format ]
D (dna): 
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H (dna): 
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I (dna): 
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T (dna): 
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P (hybrid): 
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A (protein): 
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