General information
PDB ID 4J8V
Title X-RAY STRUCTURE OF NCP145 WITH BOUND CHLORIDO(ETA-6-P-CYMENE)(N- PHENYL-2-PYRIDINECARBOTHIOAMIDE)RUTHENIUM(II)
PDB header STRUCTURAL PROTEIN/DNA
Date 2013-02-15
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.58
Kind dna
Organism XENOPUS LAEVIS, SYNTHETIC CONSTRUCT
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4j8v.pdb ABCDEFGH IJ 0
Biounits:
4j8v.pdb1.pdb ABCD J 1
4j8v.pdb2.pdb EFGH I 1
4j8v.pdb3.pdb ABCDEFGH IJ 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Histone Domain P84233_39-132 6.9e-46 1 CL0012 A 38 131 IJ   
Histone Domain P84233_39-132 6.9e-46 1 CL0012 A 38 131 IJ   
Histone Domain P84233_39-132 6.9e-46 1 CL0012 A 38 131 J   
Histone Domain P84233_39-132 6.9e-46 1 CL0012 A 38 131 J   
CENP-T_C Domain P62799_26-99 0.0000000095 1 CL0012 B 25 98 IJ   
CENP-T_C Domain P62799_26-99 0.0000000095 1 CL0012 B 25 98 IJ   
CENP-T_C Domain P62799_26-99 0.0000000095 1 CL0012 B 25 98 J   
CENP-T_C Domain P62799_26-99 0.0000000095 1 CL0012 B 25 98 J   
Histone Domain P06897_13-91 8e-16 1 CL0012 C 14 90 IJ   
Histone Domain P06897_13-91 8e-16 1 CL0012 C 14 90 IJ   
Histone Domain P06897_13-91 8e-16 1 CL0012 C 14 90 J   
Histone Domain P06897_13-91 8e-16 1 CL0012 C 14 90 J   
Histone Domain P02281_33-102 6.3e-22 1 CL0012 D 28 98 IJ   
Histone Domain P02281_33-102 6.3e-22 1 CL0012 D 28 98 IJ   
Histone Domain P02281_33-102 6.3e-22 1 CL0012 D 28 98 J   
Histone Domain P02281_33-102 6.3e-22 1 CL0012 D 28 98 J   
Histone Domain P84233_39-132 6.9e-46 1 CL0012 E 38 131 IJ   
Histone Domain P84233_39-132 6.9e-46 1 CL0012 E 38 131 IJ   
Histone Domain P84233_39-132 6.9e-46 1 CL0012 E 38 131 I   
Histone Domain P84233_39-132 6.9e-46 1 CL0012 E 38 131 I   
CENP-T_C Domain P62799_18-99 0.00000001 1 CL0012 F 20 98 IJ   
CENP-T_C Domain P62799_18-99 0.00000001 1 CL0012 F 20 98 IJ   
CENP-T_C Domain P62799_18-99 0.00000001 1 CL0012 F 20 98 I   
CENP-T_C Domain P62799_18-99 0.00000001 1 CL0012 F 20 98 I   
Histone Domain P06897_13-91 8e-16 1 CL0012 G 14 90 IJ   
Histone Domain P06897_13-91 8e-16 1 CL0012 G 14 90 IJ   
Histone Domain P06897_13-91 8e-16 1 CL0012 G 14 90 I   
Histone Domain P06897_13-91 8e-16 1 CL0012 G 14 90 I   
Histone Domain P02281_33-102 6.3e-22 1 CL0012 H 28 98 IJ   
Histone Domain P02281_33-102 6.3e-22 1 CL0012 H 28 98 IJ   
Histone Domain P02281_33-102 6.3e-22 1 CL0012 H 28 98 I   
Histone Domain P02281_33-102 6.3e-22 1 CL0012 H 28 98 I   
Histone_H2A_C Family P06897_92-120 2.5e-18 1 No_clan C 91 119   
Histone_H2A_C Family P06897_92-120 2.5e-18 1 No_clan C 91 119   
Histone_H2A_C Family P06897_92-120 2.5e-18 1 No_clan C 91 119   
Histone_H2A_C Family P06897_92-120 2.5e-18 1 No_clan C 91 119   
Histone_H2A_C Family P06897_92-120 2.5e-18 1 No_clan G 91 119   
Histone_H2A_C Family P06897_92-120 2.5e-18 1 No_clan G 91 119   
Histone_H2A_C Family P06897_92-120 2.5e-18 1 No_clan G 91 119   
Histone_H2A_C Family P06897_92-120 2.5e-18 1 No_clan G 91 119   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
4j8v.pdb1.pdb:   [ download sequences in FASTA format ]
J (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
4j8v.pdb2.pdb:   [ download sequences in FASTA format ]
I (dna): 
Click "SHOW" for view sequence
E (protein): 
Click "SHOW" for view sequence
F (protein): 
Click "SHOW" for view sequence
G (protein): 
Click "SHOW" for view sequence
H (protein): 
Click "SHOW" for view sequence
4j8v.pdb3.pdb:   [ download sequences in FASTA format ]
I (dna): 
Click "SHOW" for view sequence
J (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
E (protein): 
Click "SHOW" for view sequence
F (protein): 
Click "SHOW" for view sequence
G (protein): 
Click "SHOW" for view sequence
H (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text