General information
PDB ID 4KHN
Title CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF THE D714A MUTANT OF RB69 DNA POLYMERASE
PDB header HYDROLASE, TRANSFERASE/DNA
Date 2013-04-30
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.55
Kind dna
Organism ENTEROBACTERIA PHAGE RB69
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4khn.pdb AB CDEF 0
Biounits:
4khn.pdb1.pdb A CD 1
4khn.pdb2.pdb B EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_pol_B Family Q38087_363-784 4.6e-27 1 CL0194 A 364 788 CD  H-Bb S-Bb L-Bb L-Mn 
DNA_pol_B_exo1 Family Q38087_19-293 2.4e-26 1 CL0219 A 19 293 CD  L-Bb 
DNA_pol_B Family Q38087_363-784 8.8e-29 1 CL0194 B 362 789 EF  H-Bb S-Bb L-Bb L-Mn 
DNA_pol_B_exo1 Family Q38087_19-293 2.3e-26 1 CL0219 B 19 293 EF  L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=1-903 F 3'-5' exonuclease activity
A/B=1-903 F DNA binding
A/B=1-903 F DNA-directed DNA polymerase activity
A/B=1-903 F metal ion binding
A/B=1-903 F nucleotide binding
A/B=1-903 P bidirectional double-stranded viral DNA replication
A/B=1-903 P DNA replication
Sequences
Download file with secondary structure created by Stride  
4khn.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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4khn.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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B (protein): 
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