General information
PDB ID 4KUD
Title CRYSTAL STRUCTURE OF N-TERMINAL ACETYLATED SIR3 BAH DOMAIN D205N MUTANT IN COMPLEX WITH YEAST NUCLEOSOME CORE PARTICLE
PDB header STRUCTURAL PROTEIN/TRANSCRIPTION/DNA
Date 2013-05-22
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.2
Kind dna
Organism SACCHAROMYCES CEREVISIAE
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4kud.pdb ABCDEFGHKL IJ 0
Biounits:
4kud.pdb1.pdb ABCDEFGHKL IJ 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Histone Domain P61830_39-132 2.5e-41 1 CL0012 A 38 131 IJ  H-Bb H-Mj S-Bb L-Bb L-Mn 
CENP-T_C Domain P02309_19-99 0.0000000014 1 CL0012 B 19 98 IJ  H-Bb S-Bb L-Bb 
Histone Domain P04912_17-92 7.1e-16 1 CL0012 C 16 91 IJ  H-Bb S-Bb L-Bb 
Histone Domain P02293_38-105 4.3e-17 1 CL0012 D 37 104 IJ  H-Bb S-Bb L-Bb 
Histone Domain P61830_39-132 6.1e-42 1 CL0012 E 36 131 IJ  H-Bb H-Mj S-Bb L-Bb 
CENP-T_C Domain P02309_19-99 0.0000000015 1 CL0012 F 19 98 IJ  H-Bb H-Mj S-Bb L-Bb 
Histone Domain P04912_17-92 3.7e-16 1 CL0012 G 15 91 IJ  H-Bb S-Bb L-Bb 
Histone Domain P02293_38-105 2.6e-17 1 CL0012 H 36 104 IJ  H-Bb S-Bb L-Bb 
BAH Domain P06701_48-188 1.7e-24 1 No_clan K 48 188   
BAH Domain P06701_48-188 1.7e-24 1 No_clan L 48 188   
Histone_H2A_C Family P04912_93-122 7.4e-17 1 No_clan C 92 118   
Histone_H2A_C Family P04912_93-122 7.5e-18 1 No_clan G 92 119   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
4kud.pdb1.pdb:   [ download sequences in FASTA format ]
I (dna): 
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J (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (protein): 
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H (protein): 
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K (protein): 
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L (protein): 
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