General information
PDB ID 4KVB
Title THERMUS THERMOPHILUS HB27 30S RIBOSOMAL SUBUNIT LACKING RIBOSOMAL PROTEIN S17
PDB header RIBOSOME
Date 2013-05-22
Experimental method X-RAY DIFFRACTION
Resolution (A) 4.2
Kind rna
Organism THERMUS THERMOPHILUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4kvb.pdb BCDEFGHIJKLMNOPRSTU A 0
Biounits:
4kvb.pdb1.pdb BCDEFGHIJKLMNOPRSTU A 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_S3_C Domain P62663_120-202 1.5e-33 1 No_clan C 120 202 A   
KH_2 Domain P62663_38-111 2.1e-18 1 CL0007 C 38 111   
S4 Domain P62664_99-146 1.8e-23 1 CL0492 D 99 146 A   
Ribosomal_S5_C Domain P62665_81-152 2e-28 1 CL0329 E 81 152 A   
Ribosomal_S5 Domain P62665_6-70 2.6e-23 1 CL0196 E 6 70 A   
Ribosomal_S6 Domain P62666_3-92 4.7e-21 1 No_clan F 3 92 A   
Ribosomal_S7 Domain P62667_2-149 8.1e-63 1 No_clan G 2 149 A   
Ribosomal_S8 Domain P62668_4-138 1.4e-49 1 No_clan H 4 138 A   
Ribosomal_S15 Domain P62657_8-88 5.1e-39 1 CL0600 O 8 88 A   
Ribosomal_S19 Domain P62660_3-81 2.5e-36 1 No_clan S 3 81 A   
Ribosomal_S2 Family P62662_10-225 3.6e-91 1 CL0067 B 10 225 A   
Ribosomal_S4 Family P62664_3-98 3.4e-32 1 CL0492 D 3 98 A   
Ribosomal_S9 Family P62669_8-128 4.9e-44 1 CL0329 I 8 128 A   
Ribosomal_S10 Family P62653_5-99 7.5e-34 1 No_clan J 5 99 A   
Ribosomal_S11 Family P62654_17-126 1.7e-42 1 CL0267 K 17 126 A   
Ribosom_S12_S23 Family P61941_12-123 2.6e-40 1 CL0021 L 15 126 A   
Ribosomal_S13 Family P62655_3-109 8.9e-33 1 CL0303 M 3 109 A   
Ribosomal_S14 Family P62656_9-60 2.2e-23 1 No_clan N 9 60 A   
Ribosomal_S16 Family P62238_8-67 2.1e-26 1 No_clan P 8 67 A   
Ribosomal_S18 Family P62659_30-79 1.9e-23 1 No_clan R 30 79 A   
Ribosomal_S20p Family P62661_8-89 1.4e-20 1 No_clan T 8 89 A   
LUC7 Family 0.00058 0 No_clan T 9 103 A
Thx Family P62613_2-25 0.0000000000000022 1 No_clan U 2 25 A   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
4kvb.pdb1.pdb:   [ download sequences in FASTA format ]
B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (protein): 
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H (protein): 
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I (protein): 
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J (protein): 
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K (protein): 
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L (protein): 
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M (protein): 
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N (protein): 
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O (protein): 
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P (protein): 
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R (protein): 
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S (protein): 
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T (protein): 
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U (protein): 
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A (rna): 
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