General information
PDB ID 4KZX
Title RABBIT 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1.
PDB header RIBOSOME
Date 2013-05-30
Experimental method X-RAY DIFFRACTION
Resolution (A) 7.81
Kind rna
Organism ORYCTOLAGUS CUNICULUS, HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4kzx.pdb ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefgl i 0
Biounits:
4kzx.pdb1.pdb ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefgl i 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_S5 Domain G1U2Z9_38-100 2.6e-32 1 CL0196 C 87 151 i   
Ribosomal_S5_C Domain G1U2Z9_119-190 3.5e-27 1 CL0329 C 170 241 i   
Ribosomal_S3_C Domain G1TNM3_143-226 6.5e-23 1 No_clan D 105 188 i   
KH_2 Domain G1TNM3_58-134 0.000000000022 1 CL0007 D 20 96 i   
RS4NT Domain G1TK17_3-39 2.2e-21 1 No_clan E 3 39 i   
S4 Domain 0.00045 0 CL0492 E 42 90 i
Ribosomal_S7 Domain G1TFM5_51-204 2.9e-37 1 No_clan F 51 204 i   
Ribosomal_S27 Domain G1SK22_102-147 1.1e-28 1 CL0167 f 102 147 i   
S4 Domain B7NZS8_108-154 0.000000000039 1 CL0492 J 108 154 i   
S10_plectin Domain G1T168_63-155 5.4e-51 1 No_clan K 3 98 i   
Ribosomal_S17 Domain G1TRM4_75-144 1.8e-29 1 CL0021 L 75 144 i   
SUI1 Domain P41567_29-103 3.2e-29 1 No_clan l 29 103 i   
Ribosomal_L7Ae Domain G1SFR8_16-111 2.4e-30 1 CL0101 M 16 111 i   
Ribosomal_S13_N Domain G1SP51_2-60 2.3e-31 1 No_clan N 2 60 i   
Ribosomal_S15 Domain G1SP51_70-148 9.2e-16 1 CL0600 N 70 149 i   
Ribosomal_S19 Domain G1U0Q2_43-128 2.4e-40 1 No_clan P 43 128 i   
Ribosomal_S8 Domain G1TG89_5-130 2.1e-22 1 No_clan W 5 130 i   
Ribosomal_S26e Family G1TFE8_2-107 5.7e-52 1 No_clan a 2 107 i   
Ribosomal_S2 Family G1TGI6_113-186 0.00000000000064 1 CL0067 A 111 184 i   
Ribosomal_S2 Family G1TGI6_20-120 0.000000000033 1 CL0067 A 18 118 i   
Ribosomal_S3Ae Family G1TN72_19-221 2.8e-106 1 No_clan B 19 221 i   
Ribosomal_S27e Family G1TZ76_28-82 1.4e-30 1 CL0167 b 28 82 i   
Ribosomal_S28e Family G1TIB4_8-68 1.8e-35 1 CL0021 c 7 68 i   
Ribosomal_S14 Family G1U7M4_6-55 0.0000000000000022 1 No_clan d 6 55 i   
Ribosomal_S4e Family G1TK17_95-169 1.5e-39 1 No_clan E 95 169 i   
40S_S4_C Family G1TK17_212-258 1.7e-30 1 No_clan E 212 259 i   
Ribosomal_S30 Family G1T8A2_75-132 3.6e-29 1 No_clan e 75 132 i   
KOW Family G1TK17_177-211 0.000021 1 CL0107 E 177 211 i   
Ribosomal_S6e Family G1TM55_1-126 8e-70 1 No_clan G 1 126 i   
Ribosomal_S7e Family G1SVB0_7-191 6.6e-94 1 CL0652 H 7 191 i   
Ribosomal_S8e Family G1TJW1_2-190 4.1e-61 1 No_clan I 2 190 i   
Ribosomal_S4 Family B7NZS8_9-140 0.0000098 1 CL0492 J 10 107 i   
Ribosomal_S17_N Family G1TRM4_5-73 3.9e-37 1 No_clan L 5 73 i   
Ribosomal_S11 Family G1U472_29-147 2.6e-47 1 CL0267 O 29 147 i   
Ribosomal_S9 Family G1SGX4_40-172 4.5e-34 1 CL0329 Q 14 146 i   
Ribosomal_S17e Family G1TU13_2-122 2.1e-70 1 No_clan R 1 119 i   
Ribosomal_S13 Family G1TPG3_14-142 2.3e-56 1 CL0303 S 14 142 i   
Ribosomal_S19e Family G1TN62_5-141 4.7e-58 1 CL0123 T 5 141 i   
Ribosomal_S10 Family G1SIZ2_21-115 3.3e-31 1 No_clan U 21 115 i   
Ribosomal_S21e Family G1TM82_1-80 3.5e-40 1 No_clan V 1 80   
Ribosom_S12_S23 Family G1SZ47_29-140 1.4e-52 1 CL0021 X 29 142 i   
Ribosomal_S24e Family G1TS40_24-102 1.4e-45 1 No_clan Y 24 102 i   
Ribosomal_S25 Family G1TDB3_40-112 6.6e-38 1 CL0123 Z 41 112 i   
WD40 Repeat G1SJB4_224-260 0.0000000067 1 CL0186 g 95 133 i   
WD40 Repeat G1SJB4_224-260 0.0000000091 1 CL0186 g 53 91 i   
WD40 Repeat G1SJB4_224-260 0.000036 1 CL0186 g 136 178 i   
WD40 Repeat G1SJB4_224-260 0.000047 1 CL0186 g 182 220 i   
WD40 Repeat G1SJB4_224-260 0.00011 1 CL0186 g 224 260 i   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
4kzx.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (protein): 
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c (protein): 
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d (protein): 
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E (protein): 
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f (protein): 
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g (protein): 
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H (protein): 
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J (protein): 
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K (protein): 
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l (protein): 
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M (protein): 
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N (protein): 
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O (protein): 
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P (protein): 
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Q (protein): 
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R (protein): 
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S (protein): 
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T (protein): 
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U (protein): 
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V (protein): 
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W (protein): 
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X (protein): 
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Y (protein): 
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Z (protein): 
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i (rna): 
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