General information
PDB ID 4LD9
Title CRYSTAL STRUCTURE OF THE N-TERMINALLY ACETYLATED BAH DOMAIN OF SIR3 BOUND TO THE NUCLEOSOME CORE PARTICLE
PDB header NUCLEAR PROTEIN/TRANSCRIPTION/DNA
Date 2013-06-24
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.31
Kind dna
Organism XENOPUS LAEVIS, SACCHAROMYCES CEREVISIAE
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4ld9.pdb ABCDEFGHKL IJ 0
Biounits:
4ld9.pdb1.pdb ABCDEFGHKL IJ 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Histone Domain P84233_39-132 1.3e-46 1 CL0012 A 37 131 IJ   
CENP-T_C Domain P62799_18-99 0.000000011 1 CL0012 B 18 98 IJ   
Histone Domain P06897_19-91 0.0000000000000021 1 CL0012 C 20 90 J   
Histone Domain P02281_41-102 2.1e-20 1 CL0012 D 38 102 I   
Histone Domain P84233_46-132 3.8e-43 1 CL0012 E 44 131 IJ   
CENP-T_C Domain P62799_18-99 0.0000000095 1 CL0012 F 24 98 IJ   
Histone Domain P06897_19-91 0.0000000000000016 1 CL0012 G 18 90 IJ   
Histone Domain P02281_33-102 3.8e-21 1 CL0012 H 35 102 IJ   
BAH Domain P06701_48-188 2.7e-23 1 No_clan K 48 188   
BAH Domain P06701_48-188 1.5e-24 1 No_clan L 48 188   
Histone_H2A_C Family P06897_92-120 1.8e-16 1 No_clan C 91 117   
Histone_H2A_C Family P06897_92-120 1.9e-16 1 No_clan G 91 117   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
4ld9.pdb1.pdb:   [ download sequences in FASTA format ]
I (dna): 
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J (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (protein): 
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H (protein): 
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K (protein): 
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L (protein): 
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