General information
PDB ID 4NDY
Title HUMAN MHF1-MHF2 DNA COMPLEX
PDB header DNA BINDING PROTEIN/DNA
Date 2013-10-28
Experimental method X-RAY DIFFRACTION
Resolution (A) 7
Kind dna
Organism SYNTHETIC DNA, HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4ndy.pdb CDGHABIJKLMNQRSTUVWX EFOP 0
Biounits:
4ndy.pdb1.pdb IJMN EF 1
4ndy.pdb2.pdb KLTU EFOP 1
4ndy.pdb3.pdb QRVW OP 1
4ndy.pdb4.pdb ABSX 1
4ndy.pdb5.pdb CDGH 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
CENP-S Domain Q8N2Z9_17-92 1.4e-32 1 CL0012 A 17 92   
CENP-X Domain A8MT69_12-81 6.3e-25 1 CL0012 B 12 81   
CENP-S Domain Q8N2Z9_17-92 1.4e-32 1 CL0012 C 17 92   
CENP-X Domain A8MT69_12-81 6.3e-25 1 CL0012 D 12 81   
CENP-S Domain Q8N2Z9_17-92 1.4e-32 1 CL0012 G 17 92   
CENP-X Domain A8MT69_12-81 6.3e-25 1 CL0012 H 12 81   
CENP-S Domain Q8N2Z9_17-92 2.1e-32 1 CL0012 I 17 92   
CENP-S Domain Q8N2Z9_17-92 1.4e-32 1 CL0012 J 17 92   
CENP-S Domain Q8N2Z9_17-92 2.1e-32 1 CL0012 K 17 92   
CENP-X Domain A8MT69_12-81 6.3e-25 1 CL0012 L 12 81 F  H-Bb S-Bb 
CENP-X Domain A8MT69_12-81 6.3e-25 1 CL0012 M 12 81 F  H-Bb H-Mj S-Bb 
CENP-X Domain A8MT69_12-81 6.3e-25 1 CL0012 N 12 81   
CENP-S Domain Q8N2Z9_17-92 2.1e-32 1 CL0012 Q 17 92   
CENP-S Domain Q8N2Z9_17-92 1.4e-32 1 CL0012 R 17 92   
CENP-S Domain Q8N2Z9_17-92 1.4e-32 1 CL0012 S 17 92   
CENP-S Domain Q8N2Z9_17-92 2.1e-32 1 CL0012 T 17 92   
CENP-X Domain A8MT69_12-81 6.3e-25 1 CL0012 U 12 81 P  H-Bb H-Mj S-Bb 
CENP-X Domain A8MT69_12-81 6.3e-25 1 CL0012 V 12 81 P  H-Bb H-Mj S-Bb 
CENP-X Domain A8MT69_12-81 6.3e-25 1 CL0012 W 12 81   
CENP-X Domain A8MT69_12-81 6.3e-25 1 CL0012 X 12 81   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/C/G/I/J/K/Q/R/S/T=14-105 C condensed chromosome kinetochore
A/C/G/I/J/K/Q/R/S/T=14-105 C cytosol
A/C/G/I/J/K/Q/R/S/T=14-105 C FANCM-MHF complex
A/C/G/I/J/K/Q/R/S/T=14-105 C Fanconi anaemia nuclear complex
A/C/G/I/J/K/Q/R/S/T=14-105 C nucleoplasm
A/C/G/I/J/K/Q/R/S/T=14-105 F chromatin binding
A/C/G/I/J/K/Q/R/S/T=14-105 F DNA binding
A/C/G/I/J/K/Q/R/S/T=14-105 F protein heterodimerization activity
A/C/G/I/J/K/Q/R/S/T=14-105 P cell division
A/C/G/I/J/K/Q/R/S/T=14-105 P cellular response to DNA damage stimulus
A/C/G/I/J/K/Q/R/S/T=14-105 P CENP-A containing nucleosome assembly
A/C/G/I/J/K/Q/R/S/T=14-105 P DNA repair
A/C/G/I/J/K/Q/R/S/T=14-105 P interstrand cross-link repair
A/C/G/I/J/K/Q/R/S/T=14-105 P kinetochore assembly
A/C/G/I/J/K/Q/R/S/T=14-105 P positive regulation of protein ubiquitination
A/C/G/I/J/K/Q/R/S/T=14-105 P replication fork processing
A/C/G/I/J/K/Q/R/S/T=14-105 P resolution of meiotic recombination intermediates
B/D/H/L/M/N/U/V/W/X=8-81 C condensed chromosome kinetochore
B/D/H/L/M/N/U/V/W/X=8-81 C FANCM-MHF complex
B/D/H/L/M/N/U/V/W/X=8-81 C Fanconi anaemia nuclear complex
B/D/H/L/M/N/U/V/W/X=8-81 C nucleoplasm
B/D/H/L/M/N/U/V/W/X=8-81 F DNA binding
B/D/H/L/M/N/U/V/W/X=8-81 P cell division
B/D/H/L/M/N/U/V/W/X=8-81 P CENP-A containing nucleosome assembly
B/D/H/L/M/N/U/V/W/X=8-81 P interstrand cross-link repair
B/D/H/L/M/N/U/V/W/X=8-81 P kinetochore assembly
B/D/H/L/M/N/U/V/W/X=8-81 P positive regulation of protein ubiquitination
B/D/H/L/M/N/U/V/W/X=8-81 P replication fork processing
B/D/H/L/M/N/U/V/W/X=8-81 P resolution of meiotic recombination intermediates
Sequences
Download file with secondary structure created by Stride  
4ndy.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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I (protein): 
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J (protein): 
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M (protein): 
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N (protein): 
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4ndy.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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O (dna): 
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P (dna): 
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K (protein): 
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L (protein): 
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T (protein): 
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U (protein): 
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4ndy.pdb3.pdb:   [ download sequences in FASTA format ]
O (dna): 
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P (dna): 
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Q (protein): 
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R (protein): 
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V (protein): 
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W (protein): 
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4ndy.pdb4.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (protein): 
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S (protein): 
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X (protein): 
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4ndy.pdb5.pdb:   [ download sequences in FASTA format ]
C (protein): 
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D (protein): 
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G (protein): 
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H (protein): 
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