General information
PDB ID 4P9U
Title FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM VIBRIO CHOLERAE, IN COMPLEX WITH DNA
PDB header TRANSCRIPTION REGULATOR/DNA
Date 2014-04-05
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.21
Kind dna
Organism VIBRIO CHOLERAE
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4p9u.pdb EFAB GHCD 0
Biounits:
4p9u.pdb1.pdb EF GH 1
4p9u.pdb2.pdb AB CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
GntR Domain Q9KQU8_8-71 3.4e-20 1 CL0123 A 8 71 CD  H-Bb H-Mj L-Bb L-Mj 
GntR Domain Q9KQU8_8-71 3.4e-20 1 CL0123 B 8 71 CD  H-Bb H-Mj L-Bb L-Mj 
GntR Domain Q9KQU8_8-71 3.4e-20 1 CL0123 E 8 71 GH  H-Bb H-Mj L-Bb L-Mj 
GntR Domain Q9KQU8_8-71 3.4e-20 1 CL0123 F 8 71 GH  H-Bb H-Mj L-Bb L-Mj 
FadR_C Family Q9KQU8_72-275 7.9e-69 1 CL0388 A 72 275   
FadR_C Family Q9KQU8_72-275 7.9e-69 1 CL0388 B 72 275   
FadR_C Family Q9KQU8_72-275 7.9e-69 1 CL0388 E 72 275   
FadR_C Family Q9KQU8_72-275 7.9e-69 1 CL0388 F 72 275   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/E/F=6-277 C cytoplasm
A/B/E/F=6-277 F DNA binding
A/B/E/F=6-277 F DNA-binding transcription factor activity
A/B/E/F=6-277 F fatty-acyl-CoA binding
A/B/E/F=6-277 P fatty acid metabolic process
A/B/E/F=6-277 P negative regulation of phospholipid biosynthetic process
A/B/E/F=6-277 P regulation of fatty acid metabolic process
A/B/E/F=6-277 P regulation of transcription, DNA-templated
Sequences
Download file with secondary structure created by Stride  
4p9u.pdb1.pdb:   [ download sequences in FASTA format ]
G (dna): 
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H (dna): 
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E (protein): 
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F (protein): 
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4p9u.pdb2.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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