General information
PDB ID 4QEO
Title CRYSTAL STRUCTURE OF KRYPTONITE IN COMPLEX WITH MCHH DNA, H3(1-15) PEPTIDE AND SAH
PDB header TRANSCRIPTION/DNA
Date 2014-05-17
Experimental method X-RAY DIFFRACTION
Resolution (A) 2
Kind dna
Organism ARABIDOPSIS THALIANA, XENOPUS LAEVIS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4qeo.pdb AP CD 0
Biounits:
4qeo.pdb1.pdb AP CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
SAD_SRA Domain Q8GZB6_147-306 1e-51 1 CL0178 A 147 306 CD  H-Bb S-Bb L-Bb L-Mj L-Mn 
Pre-SET Family Q8GZB6_336-438 6.3e-18 1 No_clan A 336 438   
SET Family Q8GZB6_457-594 8.1e-16 1 No_clan A 457 594   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=93-624 C chromosome, centromeric region
A=93-624 C nucleus
A=93-624 F double-stranded methylated DNA binding
A=93-624 F histone methyltransferase activity (H3-K9 specific)
A=93-624 F methyl-CpG binding
A=93-624 F methyl-CpNpG binding
A=93-624 F methyl-CpNpN binding
A=93-624 F zinc ion binding
A=93-624 P histone H3-K9 methylation
A=93-624 P histone methylation
A=93-624 P maintenance of DNA methylation
A=93-624 P peptidyl-lysine methylation
P=2-16 C nucleoplasm
P=2-16 C nucleosome
P=2-16 F DNA binding
P=2-16 F protein heterodimerization activity
Sequences
Download file with secondary structure created by Stride  
4qeo.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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P (protein): 
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