General information
PDB ID 4QPQ
Title MECHANISTIC BASIS OF PLASMID-SPECIFIC DNA BINDING OF THE F PLASMID REGULATORY PROTEIN, TRAM
PDB header TRANSCRIPTION/DNA
Date 2014-06-24
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.11
Kind dna
Organism ESCHERICHIA COLI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4qpq.pdb ABCDEFGH PQ 0
Biounits:
4qpq.pdb1.pdb ABCDEFGH PQ 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Tra_M Family P10026_2-52 2.4e-21 1 CL0548 A 2 51 P  S-Mj 
Tra_M Family P10026_2-52 1.9e-22 1 CL0548 B 2 53 Q  S-Bb S-Mj 
Tra_M Family P10026_2-52 1.9e-22 1 CL0548 C 2 53 P  S-Bb S-Mj 
Tra_M Family P10026_2-52 1.9e-22 1 CL0548 D 2 53 PQ  S-Bb S-Mj 
Tra_M Family P10026_2-52 2.4e-21 1 CL0548 E 2 51 Q  S-Bb S-Mj 
Tra_M Family P10026_2-52 1.9e-22 1 CL0548 F 2 53 P  S-Bb S-Mj 
Tra_M Family P10026_2-52 2.4e-21 1 CL0548 G 2 51 Q  S-Bb S-Mj 
Tra_M Family P10026_2-52 1.1e-21 1 CL0548 H 2 52 P  S-Bb S-Mj 
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
4qpq.pdb1.pdb:   [ download sequences in FASTA format ]
P (dna): 
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Q (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (protein): 
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H (protein): 
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