General information
PDB ID 4R5P
Title CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) WITH DNA AND A NUCLEOSIDE TRIPHOSPHATE MIMIC ALPHA-CARBOXY NUCLEOSIDE PHOSPHONATE INHIBITOR
PDB header TRANSFERASE, HYDROLASE/DNA/INHIBITOR
Date 2014-08-21
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.89
Kind dna
Organism HUMAN IMMUNODEFICIENCY VIRUS TYPE 1, SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4r5p.pdb ACBD TPEF 0
Biounits:
4r5p.pdb1.pdb AB TP 1
4r5p.pdb2.pdb CD EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RVT_connect Domain P03366_917-1018 2.2e-59 1 No_clan A 318 419 P   
RNase_H Domain P03366_1035-1153 7.5e-27 1 CL0219 A 436 554 PT   
RVT_thumb Domain P03366_840-903 3.6e-18 1 No_clan A 241 304 TP   
RVT_connect Domain P03366_917-1018 1.3e-59 1 No_clan B 318 419   
RVT_thumb Domain P03366_840-903 3.8e-20 1 No_clan B 241 304   
RVT_connect Domain P03366_917-1018 2.2e-59 1 No_clan C 318 419 EF  S-Bb L-Bb 
RNase_H Domain P03366_1035-1153 7.5e-27 1 CL0219 C 436 554 EF  H-Bb L-Bb L-Mn 
RVT_thumb Domain P03366_840-903 3.6e-18 1 No_clan C 241 304 EF  L-Bb 
RVT_connect Domain P03366_917-1018 1.3e-59 1 No_clan D 318 419   
RVT_thumb Domain P03366_840-903 3.8e-20 1 No_clan D 241 304   
RVT_1 Family P03366_662-833 1.4e-34 1 CL0027 A 63 234 PT   
RVT_1 Family P03366_662-833 6.1e-33 1 CL0027 B 63 253   
RVT_1 Family P03366_662-833 1.4e-34 1 CL0027 C 63 234 FE   
RVT_1 Family P03366_662-833 6.1e-33 1 CL0027 D 63 253   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
4r5p.pdb1.pdb:   [ download sequences in FASTA format ]
P (dna): 
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T (dna): 
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A (protein): 
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B (protein): 
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4r5p.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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C (protein): 
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D (protein): 
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