General information
PDB ID 4R89
Title CRYSTAL STRUCTURE OF PAFAN1 - 5' FLAP DNA COMPLEX WITH MANGANASE
PDB header HYDROLASE/DNA
Date 2014-08-30
Experimental method X-RAY DIFFRACTION
Resolution (A) 4
Kind dna
Organism PSEUDOMONAS AERUGINOSA
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4r89.pdb AE BCDFGH 0
Biounits:
4r89.pdb1.pdb A BCD 1
4r89.pdb2.pdb E FGH 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
VRR_NUC Domain Q9I2N0_441-553 1.7e-35 1 CL0236 A 441 553 BD  S-Bb L-Bb 
FANC_SAP Domain Q9I2N0_105-155 1.6e-13 1 CL0306 A 105 155 D  H-Bb H-Mj L-Bb 
VRR_NUC Domain Q9I2N0_441-553 1.7e-35 1 CL0236 E 441 553 FH  S-Bb L-Bb 
FANC_SAP Domain Q9I2N0_105-155 1.6e-13 1 CL0306 E 105 155 H  H-Bb H-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/E=1-559 F 5'-3' exonuclease activity
A/E=1-559 F 5'-flap endonuclease activity
A/E=1-559 F flap-structured DNA binding
A/E=1-559 F magnesium ion binding
A/E=1-559 F manganese ion binding
A/E=1-559 F phosphodiesterase I activity
A/E=1-559 P interstrand cross-link repair
Sequences
Download file with secondary structure created by Stride  
4r89.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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D (dna): 
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A (protein): 
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4r89.pdb2.pdb:   [ download sequences in FASTA format ]
F (dna): 
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G (dna): 
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H (dna): 
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E (protein): 
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