General information
PDB ID 4RI9
Title FAN1 NUCLEASE BOUND TO 5' PHOSPHORYLATED P(DT)/3'(DT-DT-DT-DT-DT-DT- DT-DT) DOUBLE FLAP DNA
PDB header HYDROLASE/DNA
Date 2014-10-05
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.9
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4ri9.pdb AB SUVWXZYT 0
Biounits:
4ri9.pdb1.pdb A SXZY 1
4ri9.pdb2.pdb B UVWT 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
VRR_NUC Domain Q9Y2M0_893-1008 1.3e-33 1 CL0236 A 893 1008 SY  L-Bb L-Mj 
VRR_NUC Domain Q9Y2M0_893-1008 1.3e-33 1 CL0236 B 893 1008 TW  L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=370-1017 C cytosol
A/B=370-1017 C intercellular bridge
A/B=370-1017 C nucleoplasm
A/B=370-1017 C nucleus
A/B=370-1017 F 5'-3' exonuclease activity
A/B=370-1017 F 5'-flap endonuclease activity
A/B=370-1017 F flap-structured DNA binding
A/B=370-1017 F magnesium ion binding
A/B=370-1017 F phosphodiesterase I activity
A/B=370-1017 F ubiquitin-dependent protein binding
A/B=370-1017 P DNA repair
A/B=370-1017 P double-strand break repair via homologous recombination
A/B=370-1017 P interstrand cross-link repair
A/B=370-1017 P nucleotide-excision repair
A/B=370-1017 P nucleotide-excision repair, DNA incision
Sequences
Download file with secondary structure created by Stride  
4ri9.pdb1.pdb:   [ download sequences in FASTA format ]
S (dna): 
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X (dna): 
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Y (dna): 
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Z (dna): 
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A (protein): 
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4ri9.pdb2.pdb:   [ download sequences in FASTA format ]
T (dna): 
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U (dna): 
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V (dna): 
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W (dna): 
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B (protein): 
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