General information
PDB ID 4RIA
Title FAN1 NUCLEASE BOUND TO 5' PHOSPHORYLATED NICKED DNA
PDB header HYDROLASE/DNA
Date 2014-10-05
Experimental method X-RAY DIFFRACTION
Resolution (A) 3
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4ria.pdb AB FKGLIJEH 0
Biounits:
4ria.pdb1.pdb A FKGE 1
4ria.pdb2.pdb B LIJH 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
VRR_NUC Domain Q9Y2M0_893-1008 1.3e-33 1 CL0236 A 893 1008 F  L-Bb L-Mj 
VRR_NUC Domain Q9Y2M0_893-1008 1.3e-33 1 CL0236 B 893 1008 JL  L-Bb L-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=370-1017 C cytosol
A/B=370-1017 C intercellular bridge
A/B=370-1017 C nucleoplasm
A/B=370-1017 C nucleus
A/B=370-1017 F 5'-3' exonuclease activity
A/B=370-1017 F 5'-flap endonuclease activity
A/B=370-1017 F flap-structured DNA binding
A/B=370-1017 F magnesium ion binding
A/B=370-1017 F phosphodiesterase I activity
A/B=370-1017 F ubiquitin-dependent protein binding
A/B=370-1017 P DNA repair
A/B=370-1017 P double-strand break repair via homologous recombination
A/B=370-1017 P interstrand cross-link repair
A/B=370-1017 P nucleotide-excision repair
A/B=370-1017 P nucleotide-excision repair, DNA incision
Sequences
Download file with secondary structure created by Stride  
4ria.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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G (dna): 
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K (dna): 
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A (protein): 
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4ria.pdb2.pdb:   [ download sequences in FASTA format ]
H (dna): 
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I (dna): 
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J (dna): 
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L (dna): 
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B (protein): 
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