NPIDB: 4RVE structure

General information

PDB ID

4RVE

Title

THE CRYSTAL STRUCTURE OF ECORV ENDONUCLEASE AND OF ITS COMPLEXES WITH COGNATE AND NON-COGNATE DNA SEGMENTS

PDB header

HYDROLASE/DNA

Date

1993-02-18

Experimental method

X-RAY DIFFRACTION

Resolution (A)

Kind

dna

Organism

ESCHERICHIA COLI


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PDB	PDBe	MMDB	Jena	OCA
CATH	PDBsum	HSSP	PDBePISA	UniProt
ProteopediA	BIPA

Composition of PDB entry and biounits
File:	Protein chains:	DNA chains:	RNA chains:	No. of models:	Action:

PDB entry:

pdb4rve.pdb	ABC	DEF		0

Biounits:

4rve.pdb1.pdb	AB	DE		1
4rve.pdb2.pdb	CB	FA		0

Pfam domains
Name:	Type:	Domain:	E-value:	Significance:	Clan:	Prot. chain:	Start res.:	End res.:	Nuc. chains:	Int. mode:	Action:

Endonuc-EcoRV	Domain	P04390_10-241	1.8e-64	1	CL0236	A	10	240	DE	H-Bb H-Mn S-Bb S-Mj L-Bb L-Mj L-Mn
Endonuc-EcoRV	Domain	P04390_10-241	1.8e-64	1	CL0236	B	10	240	DE	H-Mn S-Bb S-Mj L-Bb L-Mj
Endonuc-EcoRV	Domain	P04390_10-241	1.8e-64	1	CL0236	B	10	240	DE	H-Bb H-Mn S-Bb S-Mj L-Bb L-Mj L-Mn
Endonuc-EcoRV	Domain	P04390_10-241	1.8e-64	1	CL0236	B	10	240	AF	H-Mn S-Bb S-Mj L-Bb L-Mj
Endonuc-EcoRV	Domain	P04390_10-241	1.8e-64	1	CL0236	B	10	240	AF	H-Bb H-Mn S-Bb S-Mj L-Bb L-Mj L-Mn
Endonuc-EcoRV	Domain	P04390_10-241	1.8e-64	1	CL0236	C	10	240	AF	H-Bb H-Mn S-Bb S-Mj L-Bb L-Mj L-Mn

SCOP domains
Classification:	Protein:	Prot. chain:	Start res.:	End res.:	Nuc. chains:	Int. mode:	Action:

Class: Alpha and beta proteins (a/b) Fold: Restriction endonuclease-like Superfamily: Restriction endonuclease-like Family: Restriction endonuclease EcoRV	Restriction endonuclease EcoRV	A	N/A	N/A	DE	H-Bb H-Mn S-Bb S-Mj L-Bb L-Mj L-Mn
Class: Alpha and beta proteins (a/b) Fold: Restriction endonuclease-like Superfamily: Restriction endonuclease-like Family: Restriction endonuclease EcoRV	Restriction endonuclease EcoRV	B	N/A	N/A	AF	H-Mn S-Bb S-Mj L-Bb L-Mj
Class: Alpha and beta proteins (a/b) Fold: Restriction endonuclease-like Superfamily: Restriction endonuclease-like Family: Restriction endonuclease EcoRV	Restriction endonuclease EcoRV	B	N/A	N/A	DE	H-Mn S-Bb S-Mj L-Bb L-Mj
Class: Alpha and beta proteins (a/b) Fold: Restriction endonuclease-like Superfamily: Restriction endonuclease-like Family: Restriction endonuclease EcoRV	Restriction endonuclease EcoRV	B	N/A	N/A	AF	H-Bb S-Bb L-Bb L-Mj L-Mn
Class: Alpha and beta proteins (a/b) Fold: Restriction endonuclease-like Superfamily: Restriction endonuclease-like Family: Restriction endonuclease EcoRV	Restriction endonuclease EcoRV	B	N/A	N/A	DE	H-Bb S-Bb L-Bb L-Mj L-Mn
Class: Alpha and beta proteins (a/b) Fold: Restriction endonuclease-like Superfamily: Restriction endonuclease-like Family: Restriction endonuclease EcoRV	Restriction endonuclease EcoRV	C	N/A	N/A	AF	H-Bb S-Bb S-Mj L-Bb L-Mj L-Mn

GO terms
Protein chains:	GO type:	GO description:
A/B/C=2-245	F	DNA binding
A/B/C=2-245	F	Type II site-specific deoxyribonuclease activity
A/B/C=2-245	F	metal ion binding
A/B/C=2-245	P	DNA restriction-modification system
A/B/C=2-245	P	nucleic acid phosphodiester bond hydrolysis

Sequences

Download file with secondary structure created by Stride

4rve.pdb1.pdb: [ download sequences in FASTA format ]

D (dna):