General information
PDB ID 4V19
Title STRUCTURE OF THE LARGE SUBUNIT OF THE MAMMALIAN MITORIBOSOME, PART 1 OF 2
PDB header RIBOSOME
Date 2014-09-25
Experimental method ELECTRON MICROSCOPY
Resolution (A) 3.4
Kind rna
Organism SUS SCROFA
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4v19.pdb 0123456789DEFIJKNOPQRSTUVWXY ACZ 0
Biounits:
4v19.pdb1.pdb 0123456789DEFIJKNOPQRSTUVWXY ACZ 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_L30 Domain F1STE5_67-117 0.00000000000067 1 No_clan 3 67 117 A   
Ribosomal_L36 Domain 3.9e-19 1 No_clan 9 63 100 A
Ribosomal_L2 Domain F1RRN2_84-166 5.2e-29 1 CL0021 D 84 166 A   
Ribosomal_L2_C Domain F1RRN2_178-280 9.2e-29 1 CL0107 D 178 281 A   
Ribosomal_L9_N Domain I3LR45_94-140 3.5e-16 1 No_clan I 94 140 A   
Ribosomal_L11_N Domain F1RU54_17-78 9.8e-24 1 No_clan K 20 78 A   
Ribosomal_L11 Domain F1RU54_83-155 1.4e-21 1 No_clan K 84 155 A   
Ribosomal_L14 Domain F1RQV7_80-193 1.1e-17 1 No_clan O 31 145 A   
Ribosomal_L22 Domain 9.5e-27 1 No_clan W 73 177 A
Ribosomal_L27 Family F1RT79_35-112 9e-24 1 No_clan 0 35 112 A   
Ribosomal_L28 Family 0.00000026 1 No_clan 1 78 138 A
MRP-L47 Family F1SGC7_66-151 3.5e-37 1 CL0346 2 66 151   
Mitoc_L55 Family 8.7e-25 1 No_clan 4 35 79
Ribosomal_L32p Family I3LTC4_98-155 0.0000000006 1 CL0167 5 80 136 A   
RecR Family 0.00048 0 No_clan 5 98 131 A
Ribosomal_L33 Family 0.0000012 1 CL0167 6 16 60 A
Ribosomal_L34 Family W5IDC1_53-95 4.1e-18 1 No_clan 7 52 95 A   
Ribosomal_L35p Family F1SVC5_103-162 1.4e-16 1 No_clan 8 102 162 A   
Ribosomal_L3 Family 9.1e-54 1 CL0575 E 113 281 A
Ribosomal_L4 Family F1S3J8_63-255 1.3e-54 1 No_clan F 80 272 A   
Ribosomal_L10 Family F1RWJ0_80-171 0.00000016 1 No_clan J 80 171 A   
Ribosomal_L13 Family 1e-46 1 No_clan N 17 141 A
Ribosomal_L27A Family F1RSH0_45-176 4.3e-28 1 CL0588 P 45 176 A   
Ribosomal_L16 Family F1RI89_57-190 4.3e-32 1 No_clan Q 57 190 A   
Ribosomal_L17 Family F1RMQ4_28-126 4.9e-24 1 No_clan R 28 126 A   
Ribosomal_L18p Family A0A0R4J8D5_70-180 0.0000000026 1 CL0267 S 61 172   
Ribosomal_L19 Family I3LNJ0_104-209 1.4e-17 1 CL0107 T 93 198   
Ribosomal_L20 Family 6.2e-38 1 No_clan U 11 116 A
Ribosomal_L21p Family F1RY70_99-202 2.4e-25 1 No_clan V 99 202 A   
Ribosomal_L23 Family 0.00000000000073 1 No_clan X 29 107 A
ribosomal_L24 Family F1RHJ1_91-154 0.00000000000032 1 No_clan Y 91 154 A   
KOW Family F1RHJ1_58-89 0.000000015 1 CL0107 Y 58 89 A   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
4v19.pdb1.pdb:   [ download sequences in FASTA format ]
0 (protein): 
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1 (protein): 
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2 (protein): 
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3 (protein): 
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4 (protein): 
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5 (protein): 
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6 (protein): 
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7 (protein): 
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8 (protein): 
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9 (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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I (protein): 
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J (protein): 
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K (protein): 
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N (protein): 
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O (protein): 
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P (protein): 
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Q (protein): 
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R (protein): 
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S (protein): 
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T (protein): 
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U (protein): 
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V (protein): 
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W (protein): 
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X (protein): 
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Y (protein): 
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A (rna): 
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C (rna): 
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Z (rna): 
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