General information
PDB ID 4Z3A
Title ACETATE-FREE STRUCTURE OF THE ENZYME-PRODUCT COMPLEX RESULTING FROM TDG ACTION ON A GU MISMATCH
PDB header HYDROLASE/DNA
Date 2015-03-31
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.72
Kind dna
Organism HOMO SAPIENS, SYNTHETIC CONSTRUCT
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb4z3a.pdb A CD 0
Biounits:
4z3a.pdb1.pdb A CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
UDG Domain Q13569_125-295 6e-19 1 No_clan A 125 295 CD  L-Bb L-Mj L-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=111-308 C nucleoplasm
A=111-308 C nucleus
A=111-308 C plasma membrane
A=111-308 C PML body
A=111-308 F ATP binding
A=111-308 F chloride ion binding
A=111-308 F damaged DNA binding
A=111-308 F DNA binding
A=111-308 F DNA N-glycosylase activity
A=111-308 F double-stranded DNA binding
A=111-308 F G/U mismatch-specific uracil-DNA glycosylase activity
A=111-308 F magnesium ion binding
A=111-308 F mismatched DNA binding
A=111-308 F protein domain specific binding
A=111-308 F protein homodimerization activity
A=111-308 F protein kinase C binding
A=111-308 F protein self-association
A=111-308 F pyrimidine-specific mismatch base pair DNA N-glycosylase activity
A=111-308 F sodium ion binding
A=111-308 F SUMO binding
A=111-308 F transcription coregulator activity
A=111-308 F transcription factor binding
A=111-308 F uracil DNA N-glycosylase activity
A=111-308 P base-excision repair
A=111-308 P base-excision repair, AP site formation
A=111-308 P chromatin organization
A=111-308 P depyrimidination
A=111-308 P DNA demethylation
A=111-308 P mismatch repair
A=111-308 P negative regulation of chromatin binding
A=111-308 P negative regulation of protein binding
A=111-308 P negative regulation of transcription by RNA polymerase II
A=111-308 P oxidative DNA demethylation
A=111-308 P regulation of DNA N-glycosylase activity
A=111-308 P regulation of embryonic development
A=111-308 P regulation of gene expression, epigenetic
Sequences
Download file with secondary structure created by Stride  
4z3a.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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