General information
PDB ID 5NSR
Title CRYO-EM STRUCTURE OF RNA POLYMERASE-SIGMA54 HOLO ENZYME WITH PROMOTER DNA CLOSED COMPLEX
PDB header TRANSCRIPTION
Date 2017-04-26
Experimental method ELECTRON MICROSCOPY
Resolution (A) 3.8
Kind dna
Organism ESCHERICHIA COLI K-12, KLEBSIELLA PNEUMONIAE
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5nsr.pdb ABCDEM FG 0
Biounits:
5nsr.pdb1.pdb ABCDEM FG 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RNA_pol_L Domain P0A7Z4_29-228 1.3e-24 1 CL0509 A 29 228   
RNA_pol_A_bac Domain P0A7Z4_58-186 7.9e-24 1 No_clan A 58 185   
RNA_pol_L Domain P0A7Z4_29-228 1.2e-24 1 CL0509 B 29 228   
RNA_pol_A_bac Domain P0A7Z4_58-186 6.8e-24 1 No_clan B 58 186   
RNA_pol_Rpb2_6 Domain P0A8V2_717-1264 1.4e-160 1 CL0410 C 717 1264   
RNA_pol_Rpb2_3 Domain P0A8V2_513-581 1.5e-30 1 No_clan C 513 581   
RNA_pol_Rpb2_45 Domain P0A8V2_591-656 6e-28 1 No_clan C 591 656   
RNA_pol_Rpb2_7 Domain P0A8V2_1266-1342 2.8e-27 1 No_clan C 1266 1341   
RNA_pol_Rpb2_2 Domain P0A8V2_329-454 5.4e-15 1 No_clan C 329 454   
RNA_pol_Rpb2_2 Domain P0A8V2_151-276 2.3e-07 1 No_clan C 151 276   
RNA_pol_Rpb1_1 Domain P0A8T7_15-342 7e-85 1 No_clan D 15 342   
RNA_pol_Rpb1_5 Domain P0A8T7_766-1317 1.6e-75 1 No_clan D 766 1317   
RNA_pol_Rpb1_2 Domain P0A8T7_386-486 3.6e-27 1 No_clan D 386 486   
RNA_pol_Rpb1_3 Domain P0A8T7_489-644 3.9e-27 1 No_clan D 489 644   
RNA_pol_Rpb1_4 Domain P0A8T7_673-764 1.7e-18 1 No_clan D 673 764   
RNA_pol_Rpb1_2 Domain P0A8T7_344-401 1.1e-07 1 No_clan D 344 401   
Sigma54_DBD Domain P06223_316-473 1.4e-57 1 CL0123 M 316 473 F   
Sigma54_CBD Domain P06223_118-257 9.7e-41 1 CL0123 M 43 264   
RNA_pol_Rpb2_1 Family P0A8V2_26-500 2.3e-58 1 No_clan C 26 500   
RNA_pol_Rpb6 Family P0A800_8-60 1e-15 1 No_clan E 8 60   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5nsr.pdb1.pdb:   [ download sequences in FASTA format ]
F (dna): 
Click "SHOW" for view sequence
G (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
E (protein): 
Click "SHOW" for view sequence
M (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text