General information
PDB ID 5ANC
Title MECHANISM OF EIF6 RELEASE FROM THE NASCENT 60S RIBOSOMAL SUBUNIT
PDB header TRANSLATION
Date 2015-09-06
Experimental method ELECTRON MICROSCOPY
Resolution (A) 4.2
Kind rna
Organism DICTYOSTELIUM DISCOIDEUM, HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5anc.pdb ABCDEFGHJK N 0
Biounits:
5anc.pdb1.pdb ABCDEFGHJK N 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_L6 Domain Q54XI5_12-85 8.1e-17 1 No_clan B 12 85 N   
Ribosomal_L6 Domain Q54XI5_97-176 0.000002 1 No_clan B 97 176 N   
Ribosomal_L11_N Domain Q54J50_3-69 9.7e-22 1 No_clan D 13 69 N   
Ribosomal_L11 Domain Q54J50_73-143 0.000000000000068 1 No_clan D 74 143 N   
Ribosomal_L14 Domain Q54G86_17-136 1.5e-31 1 No_clan E 17 136 N   
SBDS_C Domain Q9Y3A5_107-225 1.1e-39 1 CL0437 J 107 225 N   
GTP_EFTU Domain Q7Z2Z2_17-365 5e-61 1 CL0023 K 17 365   
EFG_C Domain Q7Z2Z2_979-1066 1.1e-17 1 CL0437 K 979 1066 N   
EFG_II Domain Q7Z2Z2_614-687 0.000000084 1 CL0437 K 614 687   
GTP_EFTU_D2 Domain 0.000055 0 CL0575 K 504 599
Ribosomal_L3 Family P34113_1-374 2.9e-191 1 CL0575 A 1 374 N   
Ribosomal_L10 Family P22685_4-105 1.8e-18 1 No_clan C 4 105 N   
Ribosomal_L16 Family Q54J69_12-166 1.1e-42 1 No_clan F 12 166 N   
Ribosomal_L24e Family Q54VN6_1-66 3e-26 1 CL0175 G 1 66 N   
Ribosomal_L40e Family P14794_77-126 4.7e-32 1 CL0167 H 1 50 N   
SBDS Family Q9Y3A5_14-101 7.6e-33 1 No_clan J 14 101   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5anc.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (protein): 
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H (protein): 
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J (protein): 
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K (protein): 
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N (rna): 
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