General information
PDB ID 5B40
Title THE NUCLEOSOME STRUCTURE CONTAINING H2B-K120 AND H4-K31 MONOUBIQUITINATIONS
PDB header STRUCTURAL PROTEIN/DNA
Date 2016-03-22
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.33
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5b40.pdb ABCDEFGH IJ 0
Biounits:
5b40.pdb1.pdb ABCDEFGH IJ 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Histone Domain Q71DI3_38-132 8e-44 1 CL0012 A 41 131 J  H-Bb H-Mj 
CENP-T_C Domain P62805_26-99 0.000000016 1 CL0012 B 28 98 I   
Histone Domain P04908_16-91 3.7e-16 1 CL0012 C 14 90   
Histone Domain P06899_33-102 8.2e-22 1 CL0012 D 32 101 J  H-Bb H-Mj 
Histone Domain Q71DI3_38-132 8.4e-44 1 CL0012 E 41 131 I  H-Bb H-Mj 
CENP-T_C Domain P62805_26-99 0.000000016 1 CL0012 F 27 98 J   
Histone Domain P04908_16-91 4.2e-16 1 CL0012 G 15 90   
Histone Domain P06899_33-102 2.2e-21 1 CL0012 H 34 101 I  H-Bb 
Histone_H2A_C Family P04908_92-119 1.5e-16 1 No_clan C 91 117   
Histone_H2A_C Family P04908_92-119 1.4e-17 1 No_clan G 91 118   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5b40.pdb1.pdb:   [ download sequences in FASTA format ]
I (dna): 
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J (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (protein): 
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H (protein): 
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