General information
PDB ID 5BPD
Title STRUCTURE OF TRMBL2, AN ARCHAEAL CHROMATIN PROTEIN, SHOWS A NOVEL MODE OF DNA BINDING.
PDB header DNA BINDING PROTEIN
Date 2015-05-28
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.4
Kind dna
Organism PYROCOCCUS FURIOSUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5bpd.pdb ABCD EF 0
Biounits:
5bpd.pdb1.pdb ABCD EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
TrmB Domain Q8U3H1_10-78 3.5e-20 1 CL0123 A 10 78 EF  H-Bb H-Mj L-Bb L-Mj 
TrmB Domain Q8U3H1_10-78 3.5e-20 1 CL0123 B 10 78 FE  H-Bb H-Mj L-Bb L-Mj 
TrmB Domain Q8U3H1_10-78 3.5e-20 1 CL0123 C 10 78 EF  H-Bb H-Mj L-Mj 
TrmB Domain Q8U3H1_10-78 3.5e-20 1 CL0123 D 10 78 EF  H-Bb H-Mj L-Bb L-Mj 
Regulator_TrmB Family Q8U3H1_125-264 2e-11 1 CL0479 A 125 264   
Regulator_TrmB Family Q8U3H1_125-264 3.6e-11 1 CL0479 B 125 263   
Regulator_TrmB Family Q8U3H1_125-264 2e-11 1 CL0479 C 125 264   
Regulator_TrmB Family Q8U3H1_125-264 4.9e-11 1 CL0479 D 125 262   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/C/D=1-264 F DNA binding
Sequences
Download file with secondary structure created by Stride  
5bpd.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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