General information
PDB ID 5EXH
Title CRYSTAL STRUCTURE OF MTET3-CXXC DOMAIN IN COMPLEX WITH 5- CARBOXYLCYTOSINE DNA AT 1.3 ANGSTROMS RESOLUTION.
PDB header OXIDOREDUCTASE/DNA
Date 2015-11-23
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.3
Kind dna
Organism SYNTHETIC CONSTRUCT, MUS MUSCULUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5exh.pdb C AB 0
Biounits:
5exh.pdb1.pdb C AB 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-CXXC Domain Q8BG87_52-89 7.2e-08 1 No_clan C 52 89 AB  L-Bb L-Mj L-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
C=51-96 C chromosome
C=51-96 C cytoplasm
C=51-96 C female pronucleus
C=51-96 C male pronucleus
C=51-96 C nucleoplasm
C=51-96 C nucleus
C=51-96 F methyl-CpG binding
C=51-96 F methylcytosine dioxygenase activity
C=51-96 F zinc ion binding
C=51-96 P 5-methylcytosine catabolic process
C=51-96 P DNA demethylation
C=51-96 P DNA demethylation of male pronucleus
C=51-96 P histone H3-K4 trimethylation
C=51-96 P oxidative demethylation
C=51-96 P oxidative DNA demethylation
C=51-96 P positive regulation of transcription by RNA polymerase II
C=51-96 P protein O-linked glycosylation
Sequences
Download file with secondary structure created by Stride  
5exh.pdb1.pdb:   [ download sequences in FASTA format ]
A (dna): 
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B (dna): 
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C (protein): 
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