General information
PDB ID 5F9H
Title CRYSTAL STRUCTURE OF RIG-I HELICASE-RD IN COMPLEX WITH 24-MER 5' TRIPHOSPHATE HAIRPIN RNA
PDB header HYDROLASE/RNA
Date 2015-12-09
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.1
Kind rna
Organism HOMO SAPIENS, SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5f9h.pdb ACEGIK BDFHJL 0
Biounits:
5f9h.pdb1.pdb ACEGIK BDFHJL 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RIG-I_C-RD Domain O95786_806-922 1.1e-36 1 CL0080 A 806 922 B   
DEAD Domain O95786_244-420 4.5e-17 1 CL0023 A 244 420 B   
RIG-I_C-RD Domain O95786_806-922 1.1e-36 1 CL0080 C 806 922 D   
DEAD Domain O95786_244-420 4.5e-17 1 CL0023 C 244 420 D   
RIG-I_C-RD Domain O95786_806-922 5.2e-36 1 CL0080 E 806 922 F   
DEAD Domain O95786_244-420 4.4e-17 1 CL0023 E 244 420 F   
RIG-I_C-RD Domain O95786_806-922 1.1e-36 1 CL0080 G 806 922 H   
DEAD Domain O95786_244-420 4.6e-17 1 CL0023 G 244 420 H   
RIG-I_C-RD Domain O95786_806-922 6e-37 1 CL0080 I 806 923 J   
DEAD Domain O95786_244-420 6.1e-18 1 CL0023 I 244 420 J   
RIG-I_C-RD Domain O95786_806-922 1.1e-36 1 CL0080 K 806 922 L   
DEAD Domain O95786_244-420 4.4e-17 1 CL0023 K 244 420 L   
Helicase_C Family O95786_609-734 3.8e-10 1 CL0023 A 610 734 B   
Helicase_C Family O95786_609-734 7.6e-11 1 CL0023 C 660 734 D   
Helicase_C Family O95786_609-734 1.6e-10 1 CL0023 E 610 734 F   
Helicase_C Family O95786_609-734 6.9e-13 1 CL0023 G 610 734 H   
Helicase_C Family O95786_609-734 1.4e-10 1 CL0023 I 659 734 J   
Helicase_C Family O95786_609-734 1.3e-10 1 CL0023 K 652 734 L   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5f9h.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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C (protein): 
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E (protein): 
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G (protein): 
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I (protein): 
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K (protein): 
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B (rna): 
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D (rna): 
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F (rna): 
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H (rna): 
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J (rna): 
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L (rna): 
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