General information
PDB ID 5F9R
Title CRYSTAL STRUCTURE OF CATALYTICALLY-ACTIVE STREPTOCOCCUS PYOGENES CRISPR-CAS9 IN COMPLEX WITH SINGLE-GUIDED RNA AND DOUBLE-STRANDED DNA PRIMED FOR TARGET DNA CLEAVAGE
PDB header HYDROLASE/DNA/RNA
Date 2015-12-10
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.4
Kind hybrid
Organism STREPTOCOCCUS PYOGENES SEROTYPE M1, STREPTOCOCCUS PYOGENES MGAS8232, LAMBDAPAPILLOMAVIRUS 1
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5f9r.pdb B CD A 0
Biounits:
5f9r.pdb1.pdb B CD A 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Cas9_PI Domain Q99ZW2_1102-1358 3.8e-45 1 No_clan B 1102 1358 ACD  S-Bb L-Bb L-Mj 
HNH_4 Domain Q99ZW2_821-872 8.2e-16 1 CL0263 B 821 872   
Cas9_REC Family Q99ZW2_181-712 2.4e-176 1 CL0693 B 181 712 AC   
Cas9-BH Family Q99ZW2_62-94 9.8e-10 1 No_clan B 62 94 A   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
B=1-1368 F 3'-5' exonuclease activity
B=1-1368 F DNA binding
B=1-1368 F endodeoxyribonuclease activity
B=1-1368 F metal ion binding
B=1-1368 F RNA binding
B=1-1368 P defense response to virus
B=1-1368 P maintenance of CRISPR repeat elements
Sequences
Download file with secondary structure created by Stride  
5f9r.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
Click "SHOW" for view sequence
D (dna): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
A (rna): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text