General information
PDB ID 5GAM
Title FOOT REGION OF THE YEAST SPLICEOSOMAL U4/U6.U5 TRI-SNRNP
PDB header TRANSCRIPTION
Date 2015-12-15
Experimental method ELECTRON MICROSCOPY
Resolution (A) 3.7
Kind rna
Organism SACCHAROMYCES CEREVISIAE
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5gam.pdb ACbefgxdhj UW 0
Biounits:
5gam.pdb1.pdb ACbefgxdhj UW 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
PROCN Domain P33334_470-735 1.1e-143 1 No_clan A 470 735 UW   
PRO8NT Domain P33334_131-282 2.4e-76 1 No_clan A 131 282 U   
LSM Domain P40018_10-97 2.1e-22 1 CL0527 b 10 97 U   
GTP_EFTU Domain P36048_131-442 2.8e-36 1 CL0023 C 131 443 U   
GTP_EFTU_D2 Domain P36048_481-578 1.7e-20 1 CL0575 C 481 578   
EFG_C Domain P36048_856-948 1.2e-14 1 CL0437 C 856 948   
EFG_IV Domain P36048_744-854 7.4e-13 1 CL0329 C 720 854   
LSM Domain P43321_9-74 2.1e-16 1 CL0527 d 9 74 U   
LSM Domain Q12330_19-92 2e-16 1 CL0527 e 19 92 U   
LSM Domain P54999_17-83 1.8e-19 1 CL0527 f 17 83 U   
LSM Domain P40204_5-73 3.6e-16 1 CL0527 g 5 73 U   
LSM Domain Q02260_5-97 6.1e-27 1 CL0527 h 5 97 U   
LSM Domain Q06217_37-106 1e-17 1 CL0527 j 37 106 U   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5gam.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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b (protein): 
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C (protein): 
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d (protein): 
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e (protein): 
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f (protein): 
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g (protein): 
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h (protein): 
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j (protein): 
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x (protein): 
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U (rna): 
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W (rna): 
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