General information
PDB ID 5GAO
Title HEAD REGION OF THE YEAST SPLICEOSOMAL U4/U6.U5 TRI-SNRNP
PDB header TRANSCRIPTION
Date 2015-12-15
Experimental method ELECTRON MICROSCOPY
Resolution (A) 3.6
Kind rna
Organism SACCHAROMYCES CEREVISIAE
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5gao.pdb klmnpqrEBA V 0
Biounits:
5gao.pdb1.pdb klmnpqrEBA V 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
PROCT Domain P33334_2289-2401 1.7e-45 1 No_clan A 2289 2401   
DEAD Domain P32639_500-680 3.3e-28 1 CL0023 B 500 680 V   
DEAD Domain P32639_1349-1520 0.0000000000000049 1 CL0023 B 1349 1520   
LSM Domain P40018_10-97 2.1e-22 1 CL0527 k 10 97 V   
LSM Domain Q02260_5-97 8.6e-27 1 CL0527 l 5 97 V   
LSM Domain Q06217_37-106 1e-17 1 CL0527 m 37 106 V   
LSM Domain P43321_9-74 2.1e-16 1 CL0527 n 9 74 V   
LSM Domain Q12330_19-92 4e-16 1 CL0527 p 19 92 V   
LSM Domain P54999_17-83 1.8e-19 1 CL0527 q 17 83 V   
LSM Domain P40204_5-73 3.6e-16 1 CL0527 r 5 73 V   
Sec63 Family P32639_998-1307 2.8e-77 1 No_clan B 998 1307 V   
Sec63 Family P32639_1847-2159 4.7e-62 1 No_clan B 1846 2159 V   
Helicase_C Family P32639_721-879 0.000000086 1 CL0023 B 721 879 V   
SART-1 Family Q12420_540-560 0.00016 0 No_clan E 537 560   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5gao.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
E (protein): 
Click "SHOW" for view sequence
k (protein): 
Click "SHOW" for view sequence
l (protein): 
Click "SHOW" for view sequence
m (protein): 
Click "SHOW" for view sequence
n (protein): 
Click "SHOW" for view sequence
p (protein): 
Click "SHOW" for view sequence
q (protein): 
Click "SHOW" for view sequence
r (protein): 
Click "SHOW" for view sequence
V (rna): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text