General information
PDB ID 5GIP
Title CRYSTAL STRUCTURE OF BOX C/D RNP WITH 13 NT GUIDE REGIONS AND 11 NT SUBSTRATES
PDB header TRANSFERASE/RNA
Date 2016-06-24
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.13
Kind rna
Organism SULFOLOBUS SOLFATARICUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5gip.pdb ABCDEFKLMNOP GHIJQRST 0
Biounits:
5gip.pdb1.pdb ABCDEF GHIJ 1
5gip.pdb2.pdb KLMNOP QRST 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_L7Ae Domain P55858_17-111 5.2e-34 1 CL0101 C 20 114 GH   
Ribosomal_L7Ae Domain P55858_17-111 5.2e-34 1 CL0101 D 20 114 GH   
Fibrillarin Domain P58032_6-231 2.9e-101 1 CL0063 E 6 231 GI   
Fibrillarin Domain P58032_6-231 2.9e-101 1 CL0063 F 6 231 HJ   
Ribosomal_L7Ae Domain P55858_17-111 5.2e-34 1 CL0101 M 20 114 QR   
Ribosomal_L7Ae Domain P55858_17-111 5.2e-34 1 CL0101 N 20 114 QR   
Fibrillarin Domain P58032_6-231 2.9e-101 1 CL0063 O 6 231 QS   
Fibrillarin Domain P58032_6-231 2.9e-101 1 CL0063 P 6 231 RT   
Nop Family Q97ZH3_146-373 1.9e-73 1 No_clan A 146 373 GHJI   
Nop Family Q97ZH3_146-373 1.9e-73 1 No_clan B 146 373 GHIJ   
Nop Family Q97ZH3_146-373 1.9e-73 1 No_clan K 146 373 QRTS   
Nop Family Q97ZH3_146-373 1.9e-73 1 No_clan L 146 373 QRST   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5gip.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (rna): 
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H (rna): 
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I (rna): 
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J (rna): 
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5gip.pdb2.pdb:   [ download sequences in FASTA format ]
K (protein): 
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L (protein): 
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M (protein): 
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N (protein): 
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O (protein): 
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P (protein): 
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Q (rna): 
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R (rna): 
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S (rna): 
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T (rna): 
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