General information
PDB ID 5GKG
Title STRUCTURE OF ENDOMS-DSDNA1'' COMPLEX
PDB header HYDROLASE/DNA
Date 2016-07-04
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.6
Kind dna
Organism THERMOCOCCUS KODAKARENSIS KOD1, SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5gkg.pdb AB CD 0
Biounits:
5gkg.pdb1.pdb AB CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
NucS Family Q5JER9_27-240 1.2e-84 1 CL0236 A 27 240 CD  H-Bb S-Bb L-Bb L-Mj 
NucS Family Q5JER9_27-240 1.2e-84 1 CL0236 B 27 240 CD  H-Bb S-Bb L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=1-252 C cytoplasm
A/B=1-252 F DNA binding
A/B=1-252 F single-stranded DNA endodeoxyribonuclease activity
Sequences
Download file with secondary structure created by Stride  
5gkg.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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