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Composition of PDB entry and biounits
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File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
PDB entry: | |||||
pdb5i2d.pdb | ABCDEFGHLMNOPQRS | IJTU | KV | 0 |
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Biounits: | |||||
5i2d.pdb1.pdb | ABCDEFGH | IJ | K | 1 |
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5i2d.pdb2.pdb | LMNOPQRS | TU | V | 1 |
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Pfam domains
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Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
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Domain | Q5SHR6_52-180 | 3e-25 | 1 | No_clan | A | 52 | 180 |
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Domain | Q5SHR6_26-222 | 3.7e-24 | 1 |
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A | 26 | 222 |
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Domain | Q5SHR6_253-308 | 8.5e-17 | 1 |
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A | 225 | 308 |
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Domain | Q5SHR6_52-180 | 2.9e-25 | 1 | No_clan | B | 52 | 180 |
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Domain | Q5SHR6_26-222 | 3.5e-24 | 1 |
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B | 26 | 222 |
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Domain | Q5SHR6_253-308 | 1e-16 | 1 |
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B | 224 | 308 |
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Domain | Q8RQE9_596-1026 | 6.8e-152 | 1 |
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C | 596 | 1026 |
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Domain | Q8RQE9_393-461 | 4.1e-29 | 1 | No_clan | C | 393 | 461 | IJ |
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Domain | Q8RQE9_1028-1104 | 5.2e-26 | 1 | No_clan | C | 1028 | 1104 |
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Domain | Q8RQE9_471-535 | 1.3e-24 | 1 | No_clan | C | 471 | 535 |
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Domain | Q8RQE9_142-334 | 5.7e-11 | 1 | No_clan | C | 142 | 334 | I |
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Domain | 8.5e-82 | 1 | No_clan | D | 3 | 618 |
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Domain | Q8RQE8_620-765 | 1e-35 | 1 | No_clan | D | 620 | 765 | J |
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Domain | Q8RQE8_1064-1296 | 4.1e-33 | 1 | No_clan | D | 1064 | 1254 |
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Domain | Q8RQE8_768-954 | 7.8e-29 | 1 | No_clan | D | 768 | 954 |
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Domain | Q8RQE8_1266-1432 | 5.1e-14 | 1 | No_clan | D | 1258 | 1432 |
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Domain | Q8RQE8_983-1069 | 9.1e-14 | 1 | No_clan | D | 983 | 1068 |
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Domain | Q5SKW1_187-257 | 3e-20 | 1 |
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F | 187 | 257 | J |
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Domain | Q5SKW1_357-410 | 1.7e-18 | 1 |
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F | 357 | 410 | J |
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Domain | Q53W63_114-187 | 1.4e-15 | 1 |
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G | 114 | 187 | J |
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Domain | Q53W63_1-90 | 2.8e-15 | 1 |
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G | 1 | 91 |
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Domain | Q53W63_114-187 | 1.4e-15 | 1 |
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H | 114 | 187 | J |
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Domain | Q53W63_1-90 | 2.8e-15 | 1 |
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H | 1 | 91 |
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Domain | Q5SHR6_52-180 | 3e-25 | 1 | No_clan | L | 52 | 180 |
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Domain | Q5SHR6_26-222 | 3.7e-24 | 1 |
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L | 26 | 222 |
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Domain | Q5SHR6_253-308 | 8.5e-17 | 1 |
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L | 225 | 308 |
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Domain | Q5SHR6_52-180 | 2.9e-25 | 1 | No_clan | M | 52 | 180 |
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Domain | Q5SHR6_26-222 | 3.5e-24 | 1 |
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M | 26 | 222 |
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Domain | Q5SHR6_253-308 | 1e-16 | 1 |
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M | 224 | 308 |
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Domain | Q8RQE9_596-1026 | 6.8e-152 | 1 |
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N | 596 | 1026 |
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Domain | Q8RQE9_393-461 | 4.1e-29 | 1 | No_clan | N | 393 | 461 | TU |
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Domain | Q8RQE9_1028-1104 | 5.2e-26 | 1 | No_clan | N | 1028 | 1104 |
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Domain | Q8RQE9_471-535 | 1.3e-24 | 1 | No_clan | N | 471 | 535 |
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Domain | Q8RQE9_142-334 | 5.7e-11 | 1 | No_clan | N | 142 | 334 | T |
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Domain | 8.5e-82 | 1 | No_clan | O | 3 | 618 |
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Domain | Q8RQE8_620-765 | 1e-35 | 1 | No_clan | O | 620 | 765 | U |
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Domain | Q8RQE8_1064-1296 | 4.1e-33 | 1 | No_clan | O | 1064 | 1254 |
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Domain | Q8RQE8_768-954 | 7.8e-29 | 1 | No_clan | O | 768 | 954 |
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Domain | Q8RQE8_1266-1432 | 5.1e-14 | 1 | No_clan | O | 1258 | 1432 |
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Domain | Q8RQE8_983-1069 | 9.1e-14 | 1 | No_clan | O | 983 | 1068 |
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Domain | Q5SKW1_187-257 | 3e-20 | 1 |
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Q | 187 | 257 | U |
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Domain | Q5SKW1_357-410 | 1.7e-18 | 1 |
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Q | 357 | 410 | U |
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Domain | Q53W63_114-187 | 1.4e-15 | 1 |
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R | 114 | 187 | U |
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Domain | Q53W63_1-90 | 2.8e-15 | 1 |
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R | 1 | 91 |
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Domain | Q53W63_114-187 | 1.4e-15 | 1 |
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S | 114 | 187 | U |
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Domain | Q53W63_1-90 | 2.8e-15 | 1 |
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S | 1 | 91 |
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Family | Q8RQE9_17-380 | 6.5e-39 | 1 | No_clan | C | 17 | 380 | I |
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Family | Q8RQE7_8-75 | 3.5e-07 | 1 | No_clan | E | 8 | 75 |
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Family | Q5SKW1_266-345 | 2.5e-26 | 1 |
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F | 266 | 345 | J |
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Family | Q5SKW1_79-112 | 8.7e-17 | 1 | No_clan | F | 79 | 112 |
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Family | Q8RQE9_17-380 | 6.5e-39 | 1 | No_clan | N | 17 | 380 | T |
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Family | Q8RQE7_8-75 | 3.5e-07 | 1 | No_clan | P | 8 | 75 |
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Family | Q5SKW1_266-345 | 2.5e-26 | 1 |
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Q | 266 | 345 | U |
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Family | Q5SKW1_79-112 | 8.7e-17 | 1 | No_clan | Q | 79 | 112 |
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SCOP domains
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No SCOP domains | |||||||
GO terms | ||||||
No GO terms | ||||||
Sequences
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5i2d.pdb1.pdb:
[
download sequences in FASTA format
]
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I (dna):
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J (dna):
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A (protein):
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B (protein):
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C (protein):
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D (protein):
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E (protein):
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F (protein):
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G (protein):
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H (protein):
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K (rna):
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5i2d.pdb2.pdb:
[
download sequences in FASTA format
]
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T (dna):
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U (dna):
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L (protein):
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M (protein):
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N (protein):
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O (protein):
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P (protein):
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Q (protein):
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R (protein):
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S (protein):
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V (rna):
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