General information
PDB ID 5INL
Title MOUSE TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-MG2+ COMPLEX WITH DEOXYADENOSINE
PDB header HYDROLASE/DNA
Date 2016-03-07
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.55
Kind dna
Organism MUS MUSCULUS, HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5inl.pdb AB CD 0
Biounits:
5inl.pdb1.pdb AB CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Exo_endo_phos Domain Q9JJX7_127-359 1.5e-07 1 CL0530 A 127 359 DC  H-Bb S-Bb S-Mj L-Bb L-Mj L-Mn 
Exo_endo_phos Domain Q9JJX7_127-359 1.7e-07 1 CL0530 B 127 359 CD  H-Bb S-Bb S-Mj L-Bb L-Mj L-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=118-370 C aggresome
A/B=118-370 C cytoplasm
A/B=118-370 C nuclear body
A/B=118-370 C nucleolus
A/B=118-370 C nucleoplasm
A/B=118-370 C nucleus
A/B=118-370 C PML body
A/B=118-370 F 5'-tyrosyl-DNA phosphodiesterase activity
A/B=118-370 F endonuclease activity
A/B=118-370 F magnesium ion binding
A/B=118-370 F manganese ion binding
A/B=118-370 F phosphoric diester hydrolase activity
A/B=118-370 F single-stranded DNA binding
A/B=118-370 F tyrosyl-RNA phosphodiesterase activity
A/B=118-370 P double-strand break repair
A/B=118-370 P neuron development
Sequences
Download file with secondary structure created by Stride  
5inl.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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