General information
PDB ID 5JGH
Title CRYSTAL STRUCTURE OF THE MITOCHONDRIAL DNA PACKAGING PROTEIN ABF2P IN COMPLEX WITH DNA AT 2.6 ANGSTROM RESOLUTION
PDB header DNA BINDING PROTEIN
Date 2016-04-20
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.6
Kind dna
Organism SACCHAROMYCES CEREVISIAE
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5jgh.pdb ADGJ BCEFHIKL 0
Biounits:
5jgh.pdb1.pdb AD BCEF 1
5jgh.pdb2.pdb GJ HIKL 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
HMG_box Domain Q02486_43-111 1.2e-23 1 CL0114 A 43 111 EF  H-Bb H-Mj H-Mn L-Bb L-Mn 
HMG_box Domain Q02486_116-182 0.0000000000000088 1 CL0114 A 116 182 BC  H-Bb H-Mj H-Mn L-Bb L-Mn 
HMG_box Domain Q02486_43-111 1.2e-23 1 CL0114 D 43 111 BC  H-Bb H-Mj H-Mn L-Bb L-Mn 
HMG_box Domain Q02486_116-182 0.000000000000013 1 CL0114 D 116 181 EF  H-Bb H-Mn L-Bb 
HMG_box Domain Q02486_43-111 1.2e-23 1 CL0114 G 43 111 KL  H-Bb H-Mn L-Bb L-Mj L-Mn 
HMG_box Domain Q02486_116-182 0.0000000000000088 1 CL0114 G 116 182 HI  H-Bb L-Bb L-Mj L-Mn 
HMG_box Domain Q02486_43-111 1.1e-23 1 CL0114 J 43 111 HI  H-Bb H-Mj H-Mn L-Bb L-Mn 
HMG_box Domain Q02486_116-182 0.000000000000012 1 CL0114 J 116 181 KL  H-Bb H-Mj H-Mn L-Bb L-Mn 
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5jgh.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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E (dna): 
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F (dna): 
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A (protein): 
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D (protein): 
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5jgh.pdb2.pdb:   [ download sequences in FASTA format ]
H (dna): 
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I (dna): 
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K (dna): 
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L (dna): 
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G (protein): 
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J (protein): 
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