General information
PDB ID 5K5L
Title HOMO SAPIENS CCCTC-BINDING FACTOR (CTCF) ZNF6-8 AND H19 SEQUENCE DNA COMPLEX STRUCTURE
PDB header TRANSCRIPTION/DNA
Date 2016-05-23
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.13
Kind dna
Organism SYNTHETIC CONSTRUCT, HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5k5l.pdb EFG ABCD 0
Biounits:
5k5l.pdb1.pdb EFG ABCD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-C2H2 Domain P49711_437-460 0.00025 1 CL0361 E 437 460 A  H-Bb L-Bb L-Mj 
zf-C2H2_4 Domain 0.00028 1 CL0361 E 467 490 AB
zf-C2H2 Domain P49711_437-460 0.00026 1 CL0361 F 437 460 CD  H-Bb H-Mj L-Bb L-Mj 
zf-C2H2_4 Domain 0.00029 1 CL0361 F 467 490 AC
zf-C2H2 Domain P49711_437-460 0.00059 1 CL0361 G 437 460 BD  H-Bb H-Mj L-Bb L-Mj 
zf-C2H2_4 Domain 0.00066 1 CL0361 G 467 490 CD
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5k5l.pdb1.pdb:   [ download sequences in FASTA format ]
A (dna): 
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B (dna): 
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C (dna): 
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D (dna): 
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E (protein): 
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F (protein): 
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G (protein): 
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