General information
PDB ID 5LD2
Title CRYO-EM STRUCTURE OF RECBCD+DNA COMPLEX REVEALING ACTIVATED NUCLEASE DOMAIN
PDB header HYDROLASE
Date 2016-06-23
Experimental method ELECTRON MICROSCOPY
Resolution (A) 3.83
Kind dna
Organism ESCHERICHIA COLI (STRAIN K12), ENDOTHIA GYROSA
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5ld2.pdb BCD X 0
Biounits:
5ld2.pdb1.pdb BCD X 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
UvrD-helicase Domain P08394_4-438 3.6e-70 1 CL0023 B 5 438 X  H-Bb L-Bb 
UvrD_C Domain P08394_656-810 0.000000000025 1 CL0023 B 656 810 X  L-Bb 
UvrD_C Domain 0.000017 0 CL0023 B 441 651 X
AAA_30 Domain P04993_152-395 1.7e-32 1 CL0023 D 152 395 X   
UvrD_C_2 Domain P04993_532-580 0.0000000000000079 1 CL0023 D 532 580 X   
Exonuc_V_gamma Family P07648_1-806 0 1 CL0023 C 1 806   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5ld2.pdb1.pdb:   [ download sequences in FASTA format ]
X (dna): 
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B (protein): 
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C (protein): 
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D (protein): 
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