General information
PDB ID 5OMX
Title X-RAY STRUCTURE OF THE H2A-N38C NUCLEOSOME CORE PARTICLE
PDB header DNA BINDING PROTEIN
Date 2017-08-02
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.32
Kind dna
Organism HOMO SAPIENS, XENOPUS LAEVIS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5omx.pdb ABCDEFGH IJ 0
Biounits:
5omx.pdb1.pdb ABCDEFGH IJ 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Histone Domain P84233_39-132 5.9e-45 1 CL0012 A 38 131 IJ   
CENP-T_C Domain P62799_26-99 0.0000000089 1 CL0012 B 26 98 IJ   
Histone Domain P06897_19-91 0.0000000000000029 1 CL0012 C 14 90 IJ   
Histone Domain P02281_33-102 1e-21 1 CL0012 D 32 101 IJ   
Histone Domain P84233_39-132 3.1e-45 1 CL0012 E 37 131 IJ   
CENP-T_C Domain P62799_18-99 0.00000001 1 CL0012 F 23 98 IJ   
Histone Domain P06897_19-91 0.0000000000000038 1 CL0012 G 16 90 IJ   
Histone Domain P02281_33-102 3.6e-22 1 CL0012 H 30 101 IJ   
Histone_H2A_C Family P06897_92-120 2e-17 1 No_clan C 91 118   
Histone_H2A_C Family P06897_92-120 2e-17 1 No_clan G 91 118   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5omx.pdb1.pdb:   [ download sequences in FASTA format ]
I (dna): 
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J (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (protein): 
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H (protein): 
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