General information
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| PDB ID | 5ON2 |
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| Title | QUATERNARY COMPLEX OF MUTANT T252A OF E. COLI LEUCYL-TRNA SYNTHETASE WITH TRNA(LEU), LEUCYL-ADENYLATE ANALOGUE, AND POST-TRANSFER EDITING ANALOGUE OF NORVALINE IN THE AMINOACYLATION CONFORMATION | ||||
| PDB header | TRANSLATION | ||||
| Date | 2017-08-02 | ||||
| Experimental method | X-RAY DIFFRACTION | ||||
| Resolution (A) | 3.1 | ||||
| Kind | rna | ||||
| Organism | ESCHERICHIA COLI (STRAIN K12) | ||||
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Quick Links
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Composition of PDB entry and biounits
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| File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
| PDB entry: | |||||
| pdb5on2.pdb | AD | BE | 0 |
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| Biounits: | |||||
| 5on2.pdb1.pdb | A | B | 1 |
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| 5on2.pdb2.pdb | D | E | 1 |
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Pfam domains
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| Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
tRNA-synt_1_2
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Domain | P07813_221-404 | 5.2e-78 | 1 |
CL0039
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A | 221 | 404 | B |
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Anticodon_1
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Domain | P07813_698-827 | 7.2e-17 | 1 |
CL0258
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A | 698 | 827 | B |
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tRNA-synt_1_2
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Domain | P07813_221-404 | 5.2e-78 | 1 |
CL0039
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D | 221 | 404 | E |
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Anticodon_1
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Domain | P07813_698-827 | 7.2e-17 | 1 |
CL0258
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D | 698 | 827 | E |
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tRNA-synt_1
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Family | P07813_13-174 | 1.4e-25 | 1 |
CL0039
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A | 13 | 174 | B |
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tRNA-synt_1
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Family | P07813_412-575 | 3e-07 | 1 |
CL0039
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A | 411 | 574 | B |
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tRNA-synt_1
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Family | P07813_609-659 | 9.7e-07 | 1 |
CL0039
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A | 610 | 659 | B |
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tRNA-synt_1
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Family | P07813_13-174 | 1.4e-25 | 1 |
CL0039
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D | 13 | 174 | E |
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tRNA-synt_1
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Family | P07813_412-575 | 3e-07 | 1 |
CL0039
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D | 411 | 574 | E |
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tRNA-synt_1
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Family | P07813_609-659 | 9.7e-07 | 1 |
CL0039
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D | 610 | 659 | E |
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SCOP domains
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| No SCOP domains | |||||||
| GO terms | ||
| Protein chains: | GO type: | GO description: |
| A/D=1-860 | C | cytosol |
| A/D=1-860 | F | aminoacyl-tRNA editing activity |
| A/D=1-860 | F | ATP binding |
| A/D=1-860 | F | leucine-tRNA ligase activity |
| A/D=1-860 | P | leucyl-tRNA aminoacylation |
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Sequences
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Download file with secondary structure created by Stride
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5on2.pdb1.pdb:
[
download sequences in FASTA format
]
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A (protein):
Click "SHOW" for view sequence
B (rna):
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5on2.pdb2.pdb:
[
download sequences in FASTA format
]
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D (protein):
Click "SHOW" for view sequence
E (rna):
Click "SHOW" for view sequence
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